Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZCWPW1	Gene	0	19.69	9.36	12.03	4.34	4.65	5.20	8.38
2	358428	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	379559	Transcript	0	3.36	2.39	2.52	0.95	1.20	0.74	2.56
4	360951	Transcript	0	1.89	1.55	0.89	0.00	1.08	1.29	6.09
5	398027	Transcript	0	12.46	6.24	6.72	2.69	1.27	2.90	2.80
6	324725	Transcript	0	1.03	0.00	0.00	0.00	0.00	0.00	0.00
7	IG31	Intergenic	0	31.06	51.42	32.47	41.54	9.28	39.60	13.42
8	IG31_AR1	ActiveIntergenicRegion	0	31.12	51.53	32.54	41.63	9.30	39.68	13.45
9	ER1a	ExonRegion	0	12.80	5.64	4.46	3.08	2.83	6.64	3.99
10	E1a_E2a	KnownJunction	0	6.48	6.02	3.81	1.44	1.08	3.06	0.75
11	ER2a	ExonRegion	0	25.29	8.52	12.56	2.40	2.24	11.66	11.90
12	E2a_E3a	KnownJunction	0	34.38	11.38	17.24	1.68	2.01	6.81	15.28
13	ER3a	ExonRegion	0	22.41	12.89	11.99	2.23	6.39	7.59	12.71
14	E3a_E4a	KnownJunction	0	19.44	13.42	8.71	2.79	6.13	7.48	7.38
15	ER4a	ExonRegion	1	32.39	12.87	19.91	5.54	5.70	10.74	6.39
16	E4a_E5a	KnownJunction	1	69.18	5.18	23.78	2.44	10.65	7.18	3.07
17	ER5a	ExonRegion	1	57.46	3.17	24.41	3.54	8.15	6.67	7.23
18	E5_Da	NovelBoundary	1	15.44	5.49	8.16	3.06	0.00	3.99	0.00
19	E5a_E6a	KnownJunction	0	0.58	0.00	0.00	0.00	0.00	0.00	0.00
20	E5a_E6b	KnownJunction	1	33.63	2.60	18.78	2.68	5.33	0.00	5.37
21	I5_AR1	ActiveIntronRegion	0	11.78	2.02	6.93	2.40	0.75	0.34	0.56
22	I5_AR2	ActiveIntronRegion	0	10.42	1.60	6.64	1.20	1.31	1.27	0.41
23	ER6a	ExonRegion	0	9.61	1.52	4.57	1.87	2.23	2.45	1.69
24	ER6b	ExonRegion	0	38.26	6.06	15.97	4.16	6.91	1.47	8.63
25	E6a_E7a	KnownJunction	0	17.92	5.49	10.55	5.91	7.52	0.00	6.78
26	ER7a	ExonRegion	0	17.45	8.42	13.40	8.82	6.03	2.65	8.04
27	E7a_E8a	KnownJunction	0	13.02	7.12	10.00	5.63	4.20	2.36	9.01
28	E7a_E8b	KnownJunction	0	0.63	1.63	2.31	0.00	0.00	0.00	2.38
29	ER8a	ExonRegion	0	12.29	6.38	12.36	4.99	3.24	4.60	11.13
30	ER8b	ExonRegion	0	15.76	9.89	16.71	5.52	4.42	9.48	13.98
31	E8a_E9a	KnownJunction	0	23.70	4.18	16.71	3.36	6.43	7.61	12.67
32	ER9a	ExonRegion	0	18.65	9.30	17.22	5.23	5.86	5.34	14.35
33	E9a_E10a	KnownJunction	0	1.03	4.68	3.10	1.30	0.92	0.00	3.34
34	E9a_E10b	KnownJunction	0	16.19	6.04	10.00	1.19	8.62	4.40	18.60
35	ER10a	ExonRegion	0	5.57	5.77	4.91	1.56	2.83	1.23	7.76
36	ER10b	ExonRegion	0	22.44	9.99	11.91	3.17	7.17	1.25	14.17
37	E10a_E11a	KnownJunction	0	14.34	3.78	12.21	4.63	4.33	1.10	16.71
38	ER11a	ExonRegion	0	17.49	4.32	11.85	3.64	7.37	1.63	13.07
39	E11a_E12a	KnownJunction	0	19.11	5.39	8.22	2.98	5.09	1.66	10.35
40	ER12a	ExonRegion	0	18.30	12.48	11.39	5.08	5.51	4.40	14.44
41	E12a_E13a	KnownJunction	0	13.47	9.75	7.43	3.03	4.59	1.66	9.44
42	ER13a	ExonRegion	0	16.06	10.68	12.13	0.89	3.98	1.71	11.99
43	E13a_E14a	KnownJunction	0	14.55	10.64	16.08	1.03	5.60	2.84	9.11
44	ER14a	ExonRegion	0	12.91	9.07	13.51	3.61	7.24	3.46	10.26
45	E14a_E15a	KnownJunction	0	13.34	8.25	8.71	5.99	4.03	4.34	10.07
46	ER15a	ExonRegion	0	14.64	10.02	11.35	6.01	4.29	4.57	11.45
47	E15_Da	KnownBoundary	0	15.10	10.82	14.92	5.77	4.08	4.42	11.26
48	E15a_E18b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER15b	ExonRegion	0	21.90	8.58	17.91	4.55	6.19	5.36	11.41
50	E15b_E16a	KnownJunction	1	24.27	6.12	16.18	2.41	5.56	3.30	4.26
51	E15b_E19a	KnownJunction	0	1.89	1.55	0.89	0.00	1.08	1.29	6.09
52	ER16a	ExonRegion	1	17.28	3.25	9.48	0.65	2.71	1.49	2.76
53	E16a_E18a	KnownJunction	0	9.26	1.10	6.84	0.00	0.00	1.02	2.38
54	E16a_E19a	KnownJunction	0	1.03	0.00	0.00	0.00	0.00	0.00	0.00
55	ER17a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
56	ER18a	ExonRegion	0	13.46	11.80	10.43	6.97	1.56	4.95	4.42
57	E18_Ab	KnownBoundary	0	18.84	9.38	12.56	3.25	3.25	9.41	3.32
58	ER18b	ExonRegion	1	19.86	6.75	8.90	2.59	3.03	5.84	2.68
59	E18b_E19a	KnownJunction	0	14.24	6.88	4.70	1.30	1.11	1.66	2.36
60	ER18c	ExonRegion	1	12.87	5.16	4.91	2.49	2.43	3.98	2.02
61	ER19a	ExonRegion	0	8.08	10.82	4.27	3.83	2.62	3.84	3.80