Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	IFRD1	Gene	0	1289.37	1756.95	1548.38	3197.94	209.59	3216.32	78.97
2	5558	Transcript	0	313.54	330.18	380.06	565.41	44.55	765.01	20.58
3	403825	Transcript	0	495.97	972.51	669.76	2291.38	121.13	1877.74	35.37
4	ER1a	ExonRegion	0	0.66	1.01	0.16	0.72	5.69	0.04	0.50
5	E1a_E2b	KnownJunction	0	0.00	4.76	0.68	0.00	8.53	0.00	1.75
6	ER2a	ExonRegion	0	495.97	972.51	669.76	2291.38	121.13	1877.74	35.37
7	E2_Ab	KnownBoundary	0	859.08	1740.40	1161.67	4211.64	236.11	3569.14	73.53
8	ER2b	ExonRegion	0	372.36	1210.07	479.63	2434.09	51.28	2239.00	34.15
9	E2a_E3a	KnownJunction	0	466.38	1677.27	553.47	2823.54	111.39	2412.25	33.25
10	ER3a	ExonRegion	0	728.54	2562.78	1084.15	3939.34	144.96	3795.00	67.53
11	E3a_E4a	KnownJunction	0	772.33	2815.14	1178.07	4278.12	172.97	3993.08	83.38
12	ER4a	ExonRegion	0	1198.63	3225.23	1774.44	5077.31	216.63	4906.69	95.74
13	E4a_E5a	KnownJunction	0	1604.10	3231.26	2255.70	5283.09	198.83	5644.75	104.38
14	ER5a	ExonRegion	0	1200.80	2799.17	1949.35	4558.45	257.25	4562.29	96.13
15	E5_Da	NovelBoundary	1	514.53	56.93	781.13	77.18	0.00	19.48	3.83
16	E5a_E6a	KnownJunction	0	1283.06	2631.48	1877.33	4412.65	338.88	4538.62	86.96
17	E5a_E7a	NovelJunction	1	44.98	90.32	102.00	182.70	1.18	161.95	0.00
18	ER6a	ExonRegion	0	1475.04	2467.85	1928.45	4272.14	329.85	4010.07	97.98
19	E6_Da	NovelBoundary	1	294.81	223.36	627.28	407.21	13.58	232.92	16.80
20	E6a_E7a	KnownJunction	0	1474.07	2353.05	1665.21	4471.68	343.44	4011.23	106.38
21	I6	Intron	0	335.50	146.13	573.24	251.20	8.24	165.41	7.83
22	I6_SR1	SilentIntronRegion	0	179.22	104.22	338.71	151.18	6.26	96.49	5.44
23	I6_AR1	ActiveIntronRegion	1	456.20	178.59	754.50	328.50	9.77	218.68	9.69
24	ER7a	ExonRegion	0	1604.07	2706.25	2044.69	5051.98	352.79	4483.13	117.07
25	E7a_E8a	KnownJunction	0	1430.63	2526.29	1995.72	4756.30	324.54	4209.22	85.59
26	ER8a	ExonRegion	0	1641.30	2843.51	2305.40	5336.50	335.65	4639.24	115.91
27	E8a_E9a	KnownJunction	0	974.17	2276.18	1720.56	4321.71	291.64	3797.18	89.74
28	E8a_E10a	NovelJunction	0	199.38	316.33	157.21	495.20	16.81	314.79	11.21
29	ER9a	ExonRegion	0	1059.87	2100.18	1663.24	3976.89	247.43	3597.17	94.44
30	E9a_E10a	KnownJunction	0	1179.41	1597.88	1590.29	3204.01	283.11	2850.96	79.63
31	ER10a	ExonRegion	0	2222.73	2351.32	2457.17	4798.43	433.87	4391.73	143.92
32	E10a_E11a	KnownJunction	0	4515.25	3051.37	4077.24	6215.05	354.78	5870.97	171.63
33	I10	Intron	0	205.57	65.73	339.00	131.69	10.69	118.74	8.95
34	I10_AR1	ActiveIntronRegion	0	235.96	36.90	460.45	96.64	4.71	103.37	7.50
35	I10_AR2	ActiveIntronRegion	0	170.19	64.89	321.97	127.62	6.31	113.04	8.18
36	I10_SR3	SilentIntronRegion	0	238.97	95.24	362.13	179.81	17.30	169.08	12.66
37	I10_AR5	ActiveIntronRegion	0	470.03	110.98	567.33	261.52	34.30	232.60	14.72
38	E11_Aa	NovelBoundary	0	728.00	138.56	806.36	336.17	24.21	284.48	20.67
39	ER11a	ExonRegion	0	4152.02	3337.73	3774.53	6580.32	483.99	6369.14	174.81
40	E11a_E12a	KnownJunction	0	4937.97	3199.28	4615.26	6411.84	874.12	6488.84	211.66
41	ER12a	ExonRegion	0	3619.38	2674.74	3383.45	5175.93	495.35	5093.20	137.15
42	E12a_E13a	KnownJunction	0	2312.61	2395.30	2280.73	4476.10	265.75	4876.24	93.63
43	ER13a	ExonRegion	0	1519.25	1424.52	1874.91	2572.78	202.33	3225.25	84.63
44	E13_Da	KnownBoundary	0	1114.92	1089.03	1489.82	1824.15	164.57	2487.50	69.97
45	ER13b	ExonRegion	0	939.97	984.76	1139.34	1695.50	119.44	2294.98	59.49
46	IG35	Intergenic	0	30.27	35.96	50.56	55.30	4.18	56.85	3.37
47	IG35_AR1	ActiveIntergenicRegion	0	64.40	79.99	81.78	110.65	13.45	92.82	7.70
48	IG35_AR2	ActiveIntergenicRegion	0	68.97	106.69	93.47	148.94	10.55	170.60	6.74
49	IG35_SR2	SilentIntergenicRegion	0	18.63	11.83	38.93	18.40	1.56	21.79	2.13
50	IG35_AR3	ActiveIntergenicRegion	0	17.07	12.20	33.07	15.31	1.00	16.03	0.78
51	IG35_AR7	ActiveIntergenicRegion	0	11.53	15.34	33.20	43.04	2.11	31.31	2.98
52	IG35_AR8	ActiveIntergenicRegion	0	17.63	21.81	43.02	55.75	1.64	35.07	2.55
53	IG35_SR3	SilentIntergenicRegion	0	23.40	20.03	47.71	59.29	3.79	48.94	4.74
54	IG35_AR9	ActiveIntergenicRegion	0	10.02	16.10	24.34	29.58	1.03	24.78	1.33