Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PEX1	Gene	0	47.42	13.25	51.55	18.64	119.36	15.92	43.27
2	248633	Transcript	0	48.61	13.01	49.47	18.08	118.38	14.56	40.71
3	ER1a	ExonRegion	0	9.61	3.19	5.64	3.73	24.23	2.76	6.88
4	E1a_E2a	KnownJunction	1	35.95	7.09	29.76	13.25	35.78	5.57	15.54
5	ER2a	ExonRegion	0	53.60	15.20	49.05	22.17	94.85	15.33	31.29
6	E2a_E3a	KnownJunction	0	62.20	21.73	56.42	18.29	128.59	22.16	29.14
7	E2a_E4a	NovelJunction	0	3.67	0.00	6.68	9.10	0.00	3.08	0.00
8	ER3a	ExonRegion	0	63.53	22.43	68.50	20.41	184.62	21.45	52.30
9	E3a_E4a	KnownJunction	0	78.11	20.05	88.78	24.27	98.69	19.22	57.50
10	ER4a	ExonRegion	0	53.10	25.49	71.06	27.64	89.78	30.36	51.88
11	E4a_E5a	KnownJunction	0	61.04	21.28	70.93	30.78	96.80	30.52	52.02
12	ER5a	ExonRegion	0	59.12	15.85	73.97	21.60	133.88	17.79	53.82
13	E5a_E6a	KnownJunction	0	56.56	17.65	71.28	6.80	79.44	13.19	35.77
14	ER6a	ExonRegion	0	45.43	20.10	61.67	15.38	95.95	14.80	48.51
15	E6a_E7a	KnownJunction	0	56.71	15.68	69.32	14.28	83.06	19.24	39.81
16	ER7a	ExonRegion	0	43.58	13.45	45.69	14.02	79.97	10.73	32.43
17	E7a_E8a	KnownJunction	0	36.05	8.22	39.55	8.45	67.89	13.59	24.13
18	ER8a	ExonRegion	0	39.35	5.68	42.82	7.31	106.15	7.03	29.43
19	E8a_E9a	KnownJunction	1	60.95	4.44	45.34	11.05	106.20	2.55	25.58
20	ER9a	ExonRegion	0	49.79	6.41	40.19	12.54	93.45	5.29	27.45
21	E9a_E10a	KnownJunction	0	44.61	9.01	46.47	17.69	72.48	9.33	37.51
22	ER10a	ExonRegion	0	43.58	10.17	36.18	8.78	105.07	6.13	24.88
23	E10_Da	NovelBoundary	1	16.07	1.08	18.12	1.65	44.12	0.00	3.94
24	E10a_E11a	KnownJunction	0	35.62	4.23	26.96	5.55	97.01	8.07	18.95
25	E11_Aa	NovelBoundary	1	6.98	1.63	14.92	3.71	7.15	0.00	1.89
26	ER11a	ExonRegion	0	61.75	12.19	52.00	15.86	143.54	15.27	35.82
27	E11a_E12a	KnownJunction	1	80.71	16.68	57.28	20.35	128.38	8.58	37.46
28	ER12a	ExonRegion	0	67.82	16.11	44.74	17.95	136.76	11.12	41.12
29	E12a_E13a	KnownJunction	1	58.60	14.40	30.32	14.87	126.56	3.16	27.33
30	ER13a	ExonRegion	0	48.24	9.80	46.01	21.22	148.69	9.41	43.42
31	E13a_E14a	KnownJunction	0	57.38	6.15	64.85	14.71	129.21	9.94	40.70
32	ER14a	ExonRegion	0	36.90	11.07	46.60	11.17	105.67	10.92	33.53
33	E14a_E15a	KnownJunction	0	31.54	7.30	37.79	7.56	73.58	8.76	30.65
34	ER15a	ExonRegion	0	34.84	10.58	42.33	19.14	110.77	17.04	38.08
35	E15a_E16a	KnownJunction	0	34.88	10.56	38.38	25.36	102.61	19.99	49.30
36	ER16a	ExonRegion	0	55.48	15.91	56.87	17.14	130.46	20.93	46.12
37	E16a_E17a	KnownJunction	0	44.86	12.08	39.98	17.31	126.21	10.18	57.27
38	ER17a	ExonRegion	0	51.86	13.70	51.78	16.44	128.84	13.81	51.17
39	E17a_E18a	KnownJunction	0	57.76	12.82	44.76	18.53	123.40	10.59	35.80
40	E18_Aa	NovelBoundary	1	2.77	0.00	9.04	3.36	3.32	13.19	2.81
41	ER18a	ExonRegion	0	45.12	13.35	50.73	18.90	123.84	18.81	42.32
42	E18_Da	NovelBoundary	1	19.81	1.29	21.00	3.03	6.64	16.46	10.92
43	E18a_E19a	KnownJunction	0	29.42	16.34	57.55	20.81	130.11	10.51	46.49
44	I18_AR1	ActiveIntronRegion	0	9.24	1.04	13.34	5.36	9.29	6.35	3.43
45	E19_Aa	NovelBoundary	0	36.40	2.84	40.17	9.05	8.00	13.94	14.68
46	ER19a	ExonRegion	0	42.18	16.16	47.69	27.33	126.58	15.86	56.96
47	E19_Da	NovelBoundary	1	24.88	4.60	34.27	16.23	18.88	10.10	16.18
48	E19a_E20a	KnownJunction	0	29.06	8.88	29.98	18.83	138.22	5.33	39.35
49	I19	Intron	0	11.88	1.02	14.41	3.63	9.64	5.43	8.48
50	I19_AR1	ActiveIntronRegion	0	14.13	1.55	14.47	4.54	10.34	6.46	10.41
51	I19_SR1	SilentIntronRegion	0	12.78	0.69	20.37	1.68	15.25	6.48	9.13
52	E20_Aa	NovelBoundary	1	20.70	2.97	32.16	1.41	14.34	2.81	3.60
53	ER20a	ExonRegion	0	48.81	12.10	58.20	25.59	171.03	24.22	64.02
54	E20_Da	NovelBoundary	1	21.60	0.00	21.20	1.03	8.76	9.57	12.22
55	E20a_E21a	KnownJunction	0	49.39	17.26	52.42	33.73	157.94	31.62	53.26
56	I20	Intron	0	25.63	2.54	24.34	2.20	4.84	9.56	9.23
57	I20_AR1	ActiveIntronRegion	0	24.59	2.60	23.63	2.12	6.26	10.22	9.51
58	I20_AR2	ActiveIntronRegion	0	26.33	2.52	24.83	2.25	4.00	9.20	9.09
59	E21_Aa	NovelBoundary	0	29.11	3.26	33.47	3.20	3.23	12.89	24.87
60	ER21a	ExonRegion	0	66.65	23.13	74.51	39.65	179.14	31.20	69.00
61	E21_Da	NovelBoundary	0	17.57	9.83	23.98	5.85	11.55	17.13	16.74
62	E21a_E22a	KnownJunction	0	48.23	12.14	43.20	24.65	220.75	15.92	56.49
63	ER22a	ExonRegion	0	50.44	17.27	46.61	27.68	170.33	23.85	62.93
64	E22a_E23a	KnownJunction	0	57.41	8.75	45.80	20.48	224.12	17.15	50.91
65	ER23a	ExonRegion	0	43.13	12.84	39.40	20.17	156.57	16.58	45.49
66	E23a_E24a	KnownJunction	0	31.01	10.53	46.47	19.61	100.56	15.68	32.56
67	ER24a	ExonRegion	0	32.66	5.92	39.08	10.85	75.90	12.85	31.21