Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 ETV1 Gene 0 4.72 0.07 14.63 4.23 129.08 2.92 6.38 2 403685 Transcript 0 0.00 0.00 0.80 0.35 0.53 0.00 0.00 3 405218 Transcript 0 0.28 0.00 1.24 0.00 2.23 0.00 0.22 4 399359 Transcript 0 0 0 0 0 0 0 0 5 399357 Transcript 0 0 0 0 0 0 0 0 6 343495 Transcript 0 0 0 0 0 0 0 0 7 405192 Transcript 0 0 0 0 0 0 0 0 8 242066 Transcript 0 0.61 0.00 1.94 0.51 22.96 0.05 1.72 9 405358 Transcript 0 0.00 0.00 2.37 0.00 6.01 0.00 0.00 10 403527 Transcript 0 0.00 0.00 1.24 0.12 4.47 0.00 1.12 11 ER1a ExonRegion 0 0.00 0.00 1.61 0.69 1.07 0.00 0.00 12 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 0.28 0.00 1.24 0.00 2.23 0.00 0.22 14 E2_Ab KnownBoundary 0 0.00 0.00 1.78 0.00 25.40 0.00 0.00 15 E2_Ac KnownBoundary 0 1.00 0.00 1.45 0.00 36.35 0.00 0.77 16 ER2b ExonRegion 0 0.77 0.00 2.57 0.00 42.11 0.00 0.90 17 ER2c ExonRegion 0 5.60 0.00 26.57 0.84 123.86 2.40 5.92 18 E2a_E3a KnownJunction 0 0.90 0.00 2.08 0.00 10.40 1.15 0.00 19 E2a_E4a KnownJunction 0 1.82 0.00 13.28 0.00 47.40 1.34 5.00 20 ER3a ExonRegion 0 2.83 0.00 5.16 0.96 47.90 3.04 4.21 21 E3a_E4a KnownJunction 0 3.97 0.00 3.31 0.00 54.29 4.98 8.31 22 ER4a ExonRegion 0 9.42 0.00 30.67 8.97 167.20 1.89 10.45 23 E4a_E6a KnownJunction 0 14.27 0.00 40.12 15.69 268.34 0.00 11.98 24 ER5a ExonRegion 0 0.00 0.00 1.47 0.00 7.86 0.00 0.00 25 E5a_E6a KnownJunction 0 0.00 0.00 3.28 0.00 4.17 0.00 0.00 26 ER6a ExonRegion 0 17.07 0.00 41.43 17.93 326.82 4.67 12.92 27 E6a_E7a KnownJunction 0 10.71 0.00 43.93 22.46 350.56 4.93 12.98 28 ER7a ExonRegion 0 11.69 0.00 45.92 24.37 440.05 8.43 14.45 29 E7a_E9a KnownJunction 0 8.98 0.00 29.86 13.90 531.25 12.14 12.61 30 E7a_E10a KnownJunction 0 0.00 0.00 0.00 2.87 3.27 0.00 0.00 31 E7b_E9b KnownJunction 0 0.00 0.00 0.00 0.00 2.10 0.00 0.00 32 ER7b ExonRegion 0 0.00 0.00 0.95 0.00 9.23 0.00 0.00 33 ER8a ExonRegion 0 0.00 0.00 1.17 0.24 5.19 0.00 0.84 34 E8a_E9a KnownJunction 0 0.00 0.00 1.31 0.00 3.76 0.00 1.40 35 ER9a ExonRegion 0 13.19 0.00 44.93 23.28 504.00 11.03 17.54 36 ER9b ExonRegion 0 19.66 0.00 49.14 20.32 416.84 17.19 21.11 37 E9a_E10a KnownJunction 0 22.53 0.00 51.29 22.03 292.17 16.91 25.85 38 ER10a ExonRegion 0 12.61 0.00 40.95 21.23 337.81 14.06 20.03 39 E10a_E11a KnownJunction 0 17.27 0.00 40.98 20.78 358.15 14.31 29.25 40 ER11a ExonRegion 0 5.44 0.00 22.07 11.68 270.65 7.58 17.10 41 E11a_E12a KnownJunction 0 4.54 0.00 17.63 9.21 176.70 5.98 12.45 42 ER12a ExonRegion 0 3.70 0.00 15.39 11.66 159.10 4.35 12.75 43 E12a_E13a KnownJunction 0 5.72 0.00 12.50 11.03 100.30 7.88 5.30 44 E12a_E14a KnownJunction 0 0.00 0.00 0.00 1.33 0.92 0.00 0.00 45 ER13a ExonRegion 0 4.39 0.00 10.80 7.16 104.19 7.32 8.10 46 E13a_E14a KnownJunction 0 4.77 0.00 12.62 7.45 126.91 2.84 9.89 47 ER14a ExonRegion 0 4.12 0.00 17.15 11.04 148.90 2.95 8.19 48 E14a_E15a KnownJunction 0 5.59 0.00 26.59 11.05 166.23 7.58 9.87 49 ER15a ExonRegion 0 5.26 0.00 18.94 6.54 139.25 4.51 6.52 50 E15a_E16a KnownJunction 0 4.69 0.00 16.11 7.83 154.71 4.21 6.15 51 ER16a ExonRegion 0 5.01 0.00 16.56 11.41 182.22 2.03 6.90 52 E16a_E17a KnownJunction 0 2.80 0.00 16.21 11.19 164.62 2.44 9.04 53 ER17a ExonRegion 0 3.23 0.00 12.81 9.74 143.64 3.84 8.29 54 E17_Da KnownBoundary 0 2.70 0.00 12.60 7.29 154.62 2.65 5.16 55 ER17b ExonRegion 0 9.61 0.25 28.52 4.22 252.05 5.40 10.59 56 E17_Db KnownBoundary 0 9.51 0.00 27.33 4.23 239.15 1.34 8.23 57 ER17c ExonRegion 0 9.09 0.00 28.96 4.70 198.77 4.17 9.06 58 E17_Dc KnownBoundary 0 2.24 0.00 16.02 7.75 90.07 2.87 4.06 59 ER17d ExonRegion 0 6.68 0.21 17.77 4.66 170.25 3.44 7.11 60 E17_Dd KnownBoundary 0 0.98 0.00 3.05 1.22 2.33 0.00 2.21 61 E17_De KnownBoundary 0 0.00 0.00 0.66 0.00 6.41 0.00 0.00 62 ER17e ExonRegion 0 0.77 0.00 3.39 1.25 16.40 0.00 2.87 63 ER17f ExonRegion 0 0.47 0.00 1.71 0.57 17.09 0.00 1.95 64 E17_Df KnownBoundary 0 1.00 0.00 1.78 1.44 21.60 0.00 1.48 65 ER17g ExonRegion 0 0.61 0.00 1.94 0.51 22.96 0.05 1.72