Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FRMD1	Gene	0	0.75	1.57	0.66	1.77	2.72	30.77	0.23
2	358587	Transcript	0	0.76	0.73	0.66	0.61	2.19	3.63	0.24
3	283309	Transcript	0	0.00	0.70	0.00	2.60	0.00	23.23	0.00
4	336070	Transcript	0	0.00	0.00	0.00	0.00	0.00	1.18	0.00
5	IG43_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	1.50	1.14	80.49	0.00
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E1_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	E1a_E1c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER1c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.10	0.00
11	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER1d	ExonRegion	0	0.00	0.00	0.00	1.04	0.00	20.33	0.00
13	E1b_E2a	KnownJunction	0	0.00	0.00	0.00	1.68	0.00	29.83	0.00
14	ER2a	ExonRegion	0	0.00	0.00	0.00	0.47	0.00	45.00	0.00
15	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	52.72	0.00
16	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	10.93	0.00
17	ER3a	ExonRegion	0	0.00	0.00	0.00	1.14	0.35	55.17	0.00
18	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	1.08	51.67	0.00
19	I3	Intron	0	0.00	0.27	0.00	0.29	0.00	14.89	0.00
20	I3_AR1	ActiveIntronRegion	0	0.00	0.31	0.00	0.33	0.00	17.08	0.00
21	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	26.88	0.00
22	ER4a	ExonRegion	0	0.00	1.14	0.00	0.71	0.17	56.32	0.04
23	E4_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	3.46	0.00
24	E4a_E4c	KnownJunction	0	0.00	0.00	0.00	2.76	0.00	54.11	0.00
25	ER4b	ExonRegion	0	4.59	2.11	3.97	2.85	13.11	4.59	1.41
26	E4_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER4c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.65	0.00
28	E4_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	1.29	0.00
29	E4b_E4c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.18	0.00
30	ER4d	ExonRegion	0	0.00	0.66	0.00	0.00	0.05	3.13	0.00
31	E4_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	3.30	0.00
32	ER4e	ExonRegion	0	0.00	0.43	0.00	1.09	0.00	35.92	0.00
33	E4_Dc	KnownBoundary	0	0.00	1.37	0.00	1.46	0.00	26.83	0.00
34	E4c_E5a	KnownJunction	0	0.00	1.63	0.00	0.00	0.00	5.87	0.00
35	ER4f	ExonRegion	0	0.00	1.57	0.00	1.25	0.00	28.63	0.00
36	E4d_E5a	KnownJunction	0	0.00	1.37	0.00	1.35	0.00	32.35	0.00
37	ER5a	ExonRegion	0	0.00	3.29	0.00	1.76	0.77	26.95	0.00
38	E5a_E6a	KnownJunction	0	0.00	1.18	0.00	5.34	0.00	18.87	0.00
39	E5a_E8a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	8.25	0.00
40	ER6a	ExonRegion	0	0.00	2.69	0.00	5.44	0.63	21.57	0.00
41	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	2.89	0.00
42	E6a_E8a	KnownJunction	0	0.00	2.10	0.00	5.04	0.00	15.46	0.00
43	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.17	0.00
44	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.21	0.00
45	E8_Aa	NovelBoundary	0	0.00	1.13	0.00	1.54	0.00	12.68	0.00
46	ER8a	ExonRegion	0	0.00	1.08	0.00	3.32	0.31	32.70	0.00
47	E8a_E9a	KnownJunction	0	0.00	1.21	0.00	4.12	0.97	31.86	0.00
48	ER9a	ExonRegion	0	0.00	1.65	0.00	2.27	1.08	48.94	0.00
49	E9a_E10a	KnownJunction	0	0.00	4.28	0.00	1.46	0.00	48.78	0.00
50	ER10a	ExonRegion	0	0.00	2.49	0.00	5.47	1.52	44.63	0.00
51	E10a_E11a	KnownJunction	0	0.00	3.26	0.00	8.40	2.07	41.83	0.00
52	ER11a	ExonRegion	0	0.00	2.35	0.03	2.25	1.37	58.73	0.00
53	ER11b	ExonRegion	0	0.00	0.00	0.00	0.83	0.00	8.17	0.00
54	IG42_AR5	ActiveIntergenicRegion	0	0.00	0.00	0.00	1.27	0.00	14.25	0.00
55	IG42_SR5	SilentIntergenicRegion	0	0.00	0.84	0.00	2.82	1.79	29.35	0.00
56	IG42_AR4	ActiveIntergenicRegion	0	0.00	0.63	0.00	0.42	0.85	20.34	0.11
57	IG42_SR4	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	0.97	9.44	0.01
58	IG42_SR3	SilentIntergenicRegion	0	0.00	1.40	0.00	0.00	0.11	12.02	0.00
59	IG42_AR2	ActiveIntergenicRegion	0	0.11	0.71	0.00	0.52	0.31	21.02	0.00
60	IG42_AR1	ActiveIntergenicRegion	0	0.00	0.54	0.00	0.28	0.23	24.03	0.00