Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 PNLDC1 Gene 0 2.36 1.63 4.33 3.30 0.62 2.13 0.16 2 275275 Transcript 0 0 0 0 0 0 0 0 3 392165 Transcript 0 1.49 0.00 0.83 2.49 0.00 1.15 0.00 4 392167 Transcript 0 0.00 0.00 0.78 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 0.00 0.00 0.68 0.00 0.00 0.00 0.00 6 ER1b ExonRegion 0 0.00 0.00 2.62 0.00 0.00 0.83 0.00 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1a_E2b KnownJunction 0 0.00 0.00 0.78 0.00 0.00 0.00 0.00 9 ER2a ExonRegion 0 1.42 2.54 1.69 1.83 0.28 1.74 0.00 10 E2_Ab KnownBoundary 0 1.37 1.34 5.55 4.20 1.18 3.19 0.00 11 ER2b ExonRegion 0 0.24 0.40 3.74 1.77 0.95 1.85 0.00 12 E2a_E3a KnownJunction 0 0.00 0.00 1.88 0.00 0.00 0.00 0.00 13 ER3a ExonRegion 0 0.59 0.00 2.25 0.00 0.56 0.00 0.00 14 E3a_E4a KnownJunction 0 1.97 0.00 2.39 0.00 0.00 0.00 0.00 15 ER4a ExonRegion 0 2.15 0.00 3.34 0.00 0.00 0.00 0.00 16 E4a_E5a KnownJunction 0 0.83 0.00 4.70 1.06 0.00 0.00 0.00 17 ER5a ExonRegion 0 1.61 0.00 6.08 0.30 0.48 0.00 0.00 18 E5a_E6a KnownJunction 0 1.40 0.00 5.69 1.65 1.18 0.00 0.00 19 ER6a ExonRegion 0 2.29 1.04 6.95 1.51 0.50 0.00 0.00 20 E6a_E7a KnownJunction 0 4.16 0.00 3.56 3.14 1.18 0.00 0.00 21 ER7a ExonRegion 0 3.29 0.00 3.90 3.85 0.18 2.76 0.00 22 E7a_E8a KnownJunction 0 1.03 0.00 2.76 0.00 0.00 0.00 0.00 23 ER8a ExonRegion 0 1.93 0.00 5.67 1.46 0.15 0.89 0.62 24 E8a_E9a KnownJunction 0 0.90 0.00 6.83 1.46 1.04 1.66 0.00 25 E8a_E10a KnownJunction 0 1.49 0.00 0.83 2.49 0.00 1.15 0.00 26 ER9a ExonRegion 0 0.39 2.69 6.43 1.04 0.21 1.37 0.00 27 E9a_E10a KnownJunction 0 0.00 1.23 7.07 1.08 0.00 3.03 0.00 28 ER10a ExonRegion 0 1.87 1.54 8.56 2.16 0.60 3.61 0.00 29 E10a_E11a KnownJunction 0 0.62 1.58 5.45 1.60 1.73 4.05 0.00 30 ER11a ExonRegion 0 0.90 1.17 4.52 4.94 0.95 1.80 0.00 31 E11a_E12a KnownJunction 0 1.03 1.63 2.36 1.19 0.00 0.00 0.00 32 ER12a ExonRegion 0 3.25 1.30 5.56 2.67 0.12 4.73 0.00 33 E12a_E13a KnownJunction 0 5.07 1.34 4.60 5.04 0.90 3.11 0.56 34 ER13a ExonRegion 0 3.01 1.33 4.68 5.49 1.16 3.73 0.17 35 E13a_E14a KnownJunction 0 0.00 1.21 5.75 5.88 0.00 2.92 0.67 36 ER14a ExonRegion 0 3.97 1.21 5.71 6.44 0.01 2.32 1.27 37 E14a_E15a KnownJunction 0 3.82 0.00 4.93 6.96 0.00 0.00 0.85 38 ER15a ExonRegion 0 3.45 1.19 4.88 6.41 1.37 1.65 0.53 39 E15a_E16a KnownJunction 0 3.09 2.55 2.64 6.69 2.07 2.52 0.00 40 ER16a ExonRegion 0 4.53 2.34 6.27 13.50 2.22 2.62 0.51 41 E16a_E17a KnownJunction 0 9.18 0.00 8.42 12.25 2.28 1.55 0.00 42 E17_Aa NovelBoundary 0 1.03 3.73 0.89 1.25 0.00 9.51 0.00 43 ER17a ExonRegion 0 5.65 2.99 4.96 7.73 1.56 6.95 0.00 44 E17a_E18a KnownJunction 0 6.41 3.94 3.88 4.82 1.18 2.97 0.00 45 ER18a ExonRegion 0 4.07 2.09 3.29 3.00 0.62 3.53 1.04 46 E18a_E19a KnownJunction 0 2.95 0.00 0.00 1.54 0.00 1.55 0.00 47 ER19a ExonRegion 0 2.00 3.69 1.03 2.03 0.33 0.90 0.00