Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SMOC2	Gene	0	0.88	0.79	20.83	12.27	51.78	94.85	0.16
2	366793	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	354536	Transcript	0	0	0	0	0	0	0	0
4	356284	Transcript	0	0.00	0.00	0.85	0.00	2.83	3.68	0.00
5	392103	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	392101	Transcript	0	0.00	0.00	0.24	0.00	3.09	0.00	0.00
7	392100	Transcript	0	0.00	0.00	0.00	0.44	0.00	0.00	0.00
8	IG45_AR3	ActiveIntergenicRegion	0	0.06	0.00	3.42	5.60	0.00	17.26	0.00
9	ER1a	ExonRegion	0	0.19	0.00	2.70	3.79	6.70	31.47	0.00
10	E1a_E2a	KnownJunction	0	0.70	1.05	11.42	13.68	24.07	71.45	0.00
11	ER2a	ExonRegion	0	0.82	0.54	15.29	17.83	33.74	137.97	0.00
12	E2a_E3a	KnownJunction	0	1.03	0.00	25.75	15.06	28.70	131.75	0.00
13	ER3a	ExonRegion	0	0.73	0.78	20.34	14.14	40.64	123.28	0.00
14	E3a_E4a	KnownJunction	0	0.85	0.00	21.40	13.09	53.28	107.25	0.00
15	ER4a	ExonRegion	0	1.54	0.09	20.87	9.38	46.54	101.40	0.00
16	E4a_E5a	KnownJunction	0	1.79	0.00	21.22	7.67	42.99	85.81	0.00
17	ER5a	ExonRegion	0	1.12	0.00	25.47	14.05	61.99	115.91	0.00
18	E5a_E6a	KnownJunction	0	0.00	0.00	2.21	1.11	13.79	10.85	0.00
19	E5a_E6c	KnownJunction	0	0.93	0.00	19.57	19.70	70.70	99.45	0.00
20	ER6a	ExonRegion	0	0.00	0.00	2.18	1.36	9.89	12.30	0.00
21	E6_Ab	KnownBoundary	0	0.00	0.00	0.65	0.00	1.87	6.08	0.00
22	E6_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	1.08	2.68	0.00
23	ER6b	ExonRegion	0	0.77	0.00	26.42	22.45	74.51	142.22	0.00
24	ER6c	ExonRegion	0	0.98	0.00	27.72	27.66	73.37	148.42	0.00
25	E6a_E7a	KnownJunction	0	0.75	0.00	28.87	25.06	79.79	143.08	0.00
26	ER7a	ExonRegion	0	1.53	0.00	30.54	22.11	58.94	146.14	0.00
27	E7a_E8a	KnownJunction	0	1.54	0.00	31.96	20.26	67.13	160.77	0.00
28	ER8a	ExonRegion	0	0.68	0.05	22.94	13.38	65.66	122.48	0.00
29	E8a_E9a	KnownJunction	0	0.97	1.00	26.66	13.30	50.99	104.95	0.00
30	ER9a	ExonRegion	0	0.31	1.01	15.21	10.62	43.30	84.45	0.00
31	E9a_E10a	KnownJunction	0	0.62	0.00	11.40	11.16	42.07	59.98	0.00
32	ER10a	ExonRegion	0	0.99	1.82	17.92	12.31	52.47	81.65	0.00
33	E10a_E11a	KnownJunction	0	0.73	0.00	16.55	13.00	91.47	88.06	0.00
34	ER11a	ExonRegion	0	0.77	1.21	15.81	13.72	81.39	88.88	0.00
35	ER11b	ExonRegion	0	0.95	0.99	24.26	13.72	53.32	85.73	0.02
36	E11a_E13a	KnownJunction	1	0.90	0.00	27.45	10.40	49.93	40.49	0.00
37	ER12a	ExonRegion	0	0.00	0.00	0.00	0.44	0.00	0.00	0.00
38	ER13a	ExonRegion	0	2.47	0.29	32.48	11.98	48.78	91.24	0.67
39	E13a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	3.11	0.00	0.00
40	E13a_E17a	KnownJunction	0	2.95	1.05	25.13	9.13	51.11	104.20	0.86
41	ER13b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	ER15a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER16a	ExonRegion	0	0.00	0.00	0.48	0.00	3.07	0.00	0.00
45	ER17a	ExonRegion	0	1.03	1.17	25.66	13.29	65.76	104.71	0.31
46	ER17b	ExonRegion	0	0.00	0.00	0.85	0.00	2.83	3.68	0.00
47	ER18a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	IG46_AR31	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.50	0.16	19.38	0.00
49	IG46_SR23	SilentIntergenicRegion	0	0.00	0.00	0.00	1.13	0.16	22.49	0.00
50	IG46_AR32	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.49	0.58	33.10	0.00
51	IG46_SR24	SilentIntergenicRegion	0	0.00	0.01	0.01	0.07	0.12	15.22	0.00
52	IG46_AR39	ActiveIntergenicRegion	0	2.13	0.98	0.00	0.57	0.00	13.59	4.30
53	IG46_SR31	SilentIntergenicRegion	0	0.33	4.27	0.02	0.47	0.01	12.67	0.04
54	IG46_AR40	ActiveIntergenicRegion	0	3.72	0.73	0.98	2.26	0.07	34.81	0.80
55	IG46_SR32	SilentIntergenicRegion	0	0.49	1.77	0.48	3.69	0.51	104.61	0.15
56	IG46_AR41	ActiveIntergenicRegion	0	1.67	1.72	1.36	6.08	1.82	134.34	1.23
57	IG46_SR33	SilentIntergenicRegion	0	1.92	3.87	1.35	7.01	1.87	133.48	1.35
58	IG46_AR42	ActiveIntergenicRegion	0	8.87	5.03	2.76	8.22	2.08	144.21	2.62
59	IG46_SR34	SilentIntergenicRegion	0	4.91	2.04	1.93	2.42	1.17	71.96	1.70