Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 HMGCLL1 Gene 0 2.58 0.14 1.58 0.75 0.48 0.28 0.04 2 358072 Transcript 0 0.52 0.00 0.45 0.00 0.00 0.00 0.00 3 274901 Transcript 0 0 0 0 0 0 0 0 4 398661 Transcript 0 0 0 0 0 0 0 0 5 308161 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 370852 Transcript 0 0.00 0.00 0.00 0.71 0.00 0.00 0.00 7 370850 Transcript 0 0 0 0 0 0 0 0 8 ER1a ExonRegion 0 0.50 0.00 0.34 0.82 0.00 0.00 0.00 9 E1_Ab KnownBoundary 0 0.00 0.00 0.70 0.00 0.00 0.00 0.00 10 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER1b ExonRegion 0 0.00 0.00 0.68 0.00 0.00 0.00 0.00 12 ER1c ExonRegion 0 0.84 0.63 0.06 0.65 0.31 0.08 0.00 13 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E1a_E4a KnownJunction 0 0.65 0.00 0.00 0.00 0.00 1.07 0.00 16 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3a ExonRegion 0 0.00 0.00 0.00 0.67 0.00 0.00 0.00 19 E3a_E4a KnownJunction 0 0.00 0.00 0.00 1.46 0.00 0.00 0.00 20 ER4a ExonRegion 0 1.46 0.00 0.99 0.35 0.72 1.06 0.00 21 E4a_E5a KnownJunction 0 1.90 0.00 3.66 0.00 1.18 0.00 0.00 22 ER5a ExonRegion 0 4.40 0.00 4.00 0.57 1.70 0.83 0.00 23 E5a_E6a KnownJunction 0 4.44 0.00 1.28 1.57 0.00 0.00 0.00 24 E5a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER6a ExonRegion 0 5.73 0.47 3.89 0.35 0.73 0.59 0.00 26 E6a_E7a KnownJunction 0 6.16 1.63 9.59 0.00 1.13 2.89 0.00 27 ER7a ExonRegion 0 5.85 1.56 3.66 1.96 1.24 1.76 0.00 28 E7a_E8a KnownJunction 0 7.43 0.00 3.12 3.36 0.00 2.84 0.00 29 ER8a ExonRegion 0 5.13 0.00 3.14 1.36 0.57 0.84 0.00 30 E8a_E9a KnownJunction 0 4.27 0.00 1.35 0.00 0.00 0.00 0.00 31 ER9a ExonRegion 0 3.70 0.00 1.29 2.94 0.56 0.00 0.00 32 E9_Da KnownBoundary 0 1.24 0.00 0.65 3.41 0.00 0.00 0.00 33 E9a_E9b KnownJunction 0 1.03 0.00 0.89 0.00 0.00 0.00 0.00 34 E9_Ab KnownBoundary 0 0.00 0.00 3.22 0.00 0.00 0.00 0.00 35 ER9b ExonRegion 0 2.31 0.00 2.03 3.74 0.00 0.00 0.00 36 ER9c ExonRegion 0 1.88 0.00 1.98 2.94 0.00 0.00 0.56 37 E9b_E11a KnownJunction 0 2.70 0.00 1.48 5.42 0.00 0.00 0.87 38 ER10a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER11a ExonRegion 0 2.74 0.00 1.76 1.56 0.66 0.00 0.25 40 E11a_E12a KnownJunction 0 4.04 0.00 2.54 0.00 0.00 0.00 0.00 41 ER12a ExonRegion 0 2.44 0.00 1.48 0.34 0.39 0.13 0.04 42 ER12b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00