Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RXRB	Gene	0	79.89	109.88	104.57	148.55	48.48	132.77	59.25
2	395178	Transcript	0	0	0	0	0	0	0	0
3	374680	Transcript	0	0	0	0	0	0	0	0
4	374683	Transcript	0	8.03	21.91	5.66	33.57	0.00	20.96	0.79
5	374685	Transcript	0	2.31	2.43	1.35	2.49	0.00	1.23	0.00
6	374681	Transcript	0	1.95	2.78	1.66	3.98	1.22	0.54	0.30
7	IG32	Intergenic	0	6.21	10.27	1.50	2.21	7.00	1.10	1.19
8	IG32_AR1	ActiveIntergenicRegion	0	6.27	10.39	1.52	2.23	7.07	1.11	1.21
9	ER1a	ExonRegion	0	44.46	84.00	75.90	85.89	28.04	103.45	33.81
10	E1_Ab	KnownBoundary	0	86.69	143.21	124.43	149.49	42.23	194.91	60.55
11	ER1b	ExonRegion	0	25.05	54.52	31.82	65.22	11.72	78.00	16.55
12	E1a_E3a	KnownJunction	0	5.31	16.60	6.87	26.79	2.21	31.09	7.21
13	E1a_E4a	KnownJunction	0	8.03	21.91	5.66	33.57	0.00	20.96	0.79
14	E2_Aa	NovelBoundary	1	23.00	20.96	11.68	13.63	3.32	4.18	2.26
15	ER2a	ExonRegion	0	3.90	5.56	3.32	7.95	2.45	1.08	0.60
16	E2_Da	NovelBoundary	1	34.73	35.20	21.27	27.82	6.87	14.28	0.54
17	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	I2	Intron	1	22.27	20.81	16.89	11.49	3.46	5.45	2.57
19	I2_AR1	ActiveIntronRegion	1	22.67	16.32	14.11	12.23	3.09	3.31	2.85
20	I2_SR1	SilentIntronRegion	1	22.19	25.83	20.06	10.89	3.90	7.76	2.32
21	ER3a	ExonRegion	0	10.00	16.37	14.15	22.88	7.81	18.58	9.06
22	E3a_E4a	KnownJunction	0	24.98	15.84	35.29	29.53	12.77	26.34	19.86
23	E4_Aa	NovelBoundary	1	25.54	11.06	27.17	9.94	5.35	9.46	3.55
24	ER4a	ExonRegion	0	48.26	90.02	62.16	106.72	17.48	120.78	34.91
25	E4a_E5a	KnownJunction	0	67.91	118.90	80.73	115.79	21.72	139.79	55.65
26	ER5a	ExonRegion	0	52.43	125.99	71.61	131.87	24.30	135.57	45.28
27	E5a_E6a	KnownJunction	0	46.06	117.99	73.92	96.47	21.49	90.80	46.32
28	ER6a	ExonRegion	0	48.31	91.06	68.72	125.94	42.07	92.73	41.77
29	E6a_E7a	KnownJunction	0	69.30	130.52	95.79	153.20	38.75	111.46	66.25
30	I6	Intron	0	7.42	21.58	9.71	9.77	11.08	9.38	5.02
31	I6_AR1	ActiveIntronRegion	0	7.46	21.67	9.76	9.81	11.13	9.43	5.05
32	E7_Aa	NovelBoundary	0	6.74	24.64	14.41	11.70	17.77	8.63	12.80
33	ER7a	ExonRegion	0	91.24	174.61	127.14	248.82	73.90	171.27	97.89
34	E7_Da	NovelBoundary	0	19.96	48.79	25.72	30.29	21.37	25.08	21.28
35	E7a_E8a	KnownJunction	0	93.28	135.93	137.74	214.83	59.55	143.62	113.50
36	I7	Intron	0	22.03	25.50	17.49	30.53	14.33	31.18	9.89
37	I7_AR1	ActiveIntronRegion	0	22.30	25.82	17.70	30.92	14.50	31.55	10.02
38	E8_Aa	NovelBoundary	0	20.23	44.61	22.22	36.11	16.55	61.99	12.14
39	ER8a	ExonRegion	0	143.76	197.61	171.84	291.59	115.44	227.59	137.32
40	E8a_E9a	KnownJunction	0	40.59	59.37	59.39	91.51	56.43	87.88	38.08
41	E8a_E9b	KnownJunction	0	87.71	71.25	88.66	95.01	56.41	62.15	71.38
42	E8a_E10a	NovelJunction	1	46.45	38.72	23.67	60.66	5.37	71.50	16.41
43	E9_Ab	NovelBoundary	0	25.87	46.68	46.36	51.50	29.48	53.22	29.52
44	ER9a	ExonRegion	0	51.84	72.24	74.46	102.25	64.54	95.82	51.89
45	ER9b	ExonRegion	0	162.49	163.73	217.83	202.91	144.16	166.45	163.75
46	E9a_E10a	KnownJunction	0	171.81	154.98	223.14	225.94	102.88	161.82	171.72
47	E10_Aa	NovelBoundary	1	77.27	14.74	93.75	12.81	4.22	6.62	4.94
48	ER10a	ExonRegion	0	140.23	197.09	190.87	277.70	94.92	226.08	141.49
49	E10a_E11a	KnownJunction	0	130.90	188.52	170.25	249.59	66.09	201.21	109.13
50	ER11a	ExonRegion	0	110.02	128.64	142.40	180.67	58.74	164.24	67.39
51	ER11b	ExonRegion	0	2.31	2.43	1.35	2.49	0.00	1.23	0.00