Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	HLA-DQB1	Gene	0	427.54	139.19	46.97	13.88	13.27	10.36	60.99
2	399074	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	399065	Transcript	0	11.91	18.83	1.52	1.25	0.30	0.92	7.34
4	399084	Transcript	0	0.74	0.00	0.22	0.00	0.00	0.00	0.00
5	334399	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	399088	Transcript	0	0	0	0	0	0	0	0
7	374943	Transcript	0	0	0	0	0	0	0	0
8	399079	Transcript	0	0	0	0	0	0	0	0
9	399082	Transcript	0	3.10	0.00	0.00	0.00	0.00	0.00	1.32
10	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER3a	ExonRegion	0	1.48	0.00	0.44	0.00	0.00	0.00	0.00
13	E3a_E4c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER4a	ExonRegion	0	0.26	0.40	0.11	2.49	0.00	0.00	0.11
15	E4_Ae	KnownBoundary	1	128.48	55.83	26.37	1.27	32.99	7.37	74.31
16	ER4b	ExonRegion	0	7.90	7.55	1.94	2.49	0.46	2.28	2.84
17	ER4c	ExonRegion	1	58.91	39.28	11.18	3.95	12.28	4.50	29.57
18	ER4d	ExonRegion	1	137.49	105.09	26.02	6.44	34.89	6.13	76.73
19	ER4e	ExonRegion	0	330.44	163.07	35.74	16.58	12.13	6.63	69.32
20	E4a_E5b	KnownJunction	1	74.74	204.21	8.68	16.28	1.11	13.00	45.75
21	E4a_E6a	KnownJunction	0	3.10	0.00	0.00	0.00	0.00	0.00	1.32
22	ER5a	ExonRegion	0	23.82	37.66	3.05	2.49	0.61	1.84	14.67
23	ER5b	ExonRegion	0	301.30	73.96	41.54	5.63	10.51	6.37	80.22
24	E5a_E6a	KnownJunction	0	293.43	278.63	46.70	18.12	13.35	18.01	70.08
25	ER6a	ExonRegion	0	511.31	322.65	61.40	24.59	20.06	25.97	111.41
26	E6_Da	NovelBoundary	1	58.88	1.10	17.20	0.00	0.00	0.00	2.67
27	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E6a_E9a	KnownJunction	0	36.00	0.00	4.11	0.00	0.00	0.00	9.26
29	I6	Intron	1	77.84	1.99	15.26	0.18	0.16	0.00	2.01
30	I6_AR1	ActiveIntronRegion	1	78.13	1.99	15.31	0.18	0.16	0.00	2.02
31	ER7a	ExonRegion	0	947.30	383.97	87.30	38.96	32.78	33.40	118.67
32	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	E7a_E9a	KnownJunction	0	1145.90	395.17	103.68	44.16	30.71	26.99	126.35
34	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	ER8a	ExonRegion	0	0.10	0.00	0.08	0.00	0.00	0.00	0.00
36	ER8b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER9a	ExonRegion	0	1140.25	351.01	110.12	35.45	29.10	25.40	145.62
38	ER9b	ExonRegion	0	641.23	152.81	61.34	20.65	20.49	11.44	71.87
39	E9_Db	KnownBoundary	1	506.81	41.17	47.39	4.61	13.05	1.05	12.14
40	ER9c	ExonRegion	1	355.88	30.66	42.56	4.44	4.52	1.09	11.89