Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 CDKAL1 Gene 0 58.24 18.09 70.29 34.58 82.54 26.88 35.62 2 274695 Transcript 0 1.19 0.67 1.45 0.55 5.69 1.66 0.67 3 378624 Transcript 0 14.04 3.89 9.99 7.27 9.82 4.34 3.79 4 397216 Transcript 0 0 0 0 0 0 0 0 5 378610 Transcript 0 44.25 7.87 37.58 20.31 71.76 18.93 23.31 6 ER1a ExonRegion 0 0.62 0.81 1.55 1.66 15.35 2.28 1.35 7 ER1b ExonRegion 0 15.22 6.11 18.75 8.03 49.98 9.04 6.69 8 E1a_E2a KnownJunction 0 37.84 8.64 45.01 12.62 24.34 12.44 17.50 9 ER2a ExonRegion 0 38.60 23.19 54.67 32.42 37.14 30.45 26.86 10 E2a_E3a KnownJunction 0 1.42 0.00 2.11 0.00 0.90 1.47 0.00 11 E2a_E3c KnownJunction 0 30.59 30.34 53.18 48.41 39.21 34.54 34.98 12 ER3a ExonRegion 0 1.54 1.21 0.68 0.00 0.81 1.23 0.67 13 ER3b ExonRegion 0 9.53 7.29 12.87 9.23 9.56 9.81 8.90 14 ER3c ExonRegion 0 92.55 55.75 134.62 73.42 96.46 64.04 60.92 15 E3a_E4a KnownJunction 0 78.38 52.39 89.12 61.85 80.92 62.95 48.33 16 E3a_E5a KnownJunction 0 1.00 3.02 6.71 1.68 1.18 0.00 0.89 17 E4_Aa NovelBoundary 1 25.75 0.00 30.45 0.00 0.00 2.79 0.00 18 ER4a ExonRegion 0 59.01 43.20 94.10 56.37 69.07 55.48 46.62 19 E4a_E5a KnownJunction 0 48.82 22.09 82.08 55.29 77.41 52.93 44.14 20 ER5a ExonRegion 0 49.05 24.25 73.46 52.72 70.62 39.98 46.29 21 E5a_E6a KnownJunction 0 47.73 21.86 59.82 39.82 61.57 31.44 39.91 22 ER6a ExonRegion 0 52.14 21.65 69.30 43.13 62.14 41.38 33.52 23 E6a_E7a KnownJunction 0 45.03 23.51 61.78 42.07 64.62 35.99 42.36 24 ER7a ExonRegion 0 50.87 27.02 65.57 42.22 74.11 36.28 42.55 25 E7a_E8a KnownJunction 0 49.10 23.22 53.90 38.82 74.58 35.97 32.73 26 ER8a ExonRegion 0 71.59 31.20 84.94 48.35 101.33 29.60 43.67 27 E8a_E9a KnownJunction 0 68.23 35.39 88.74 42.42 109.82 18.04 42.19 28 ER9a ExonRegion 0 71.37 30.34 94.13 44.38 96.72 23.15 46.97 29 E9a_E10a KnownJunction 0 76.57 19.52 90.63 31.83 115.45 27.34 47.06 30 ER10a ExonRegion 0 69.10 17.15 99.43 45.46 95.39 33.89 46.00 31 E10a_E11a KnownJunction 0 75.56 12.77 104.50 40.26 97.63 20.61 41.49 32 ER11a ExonRegion 0 67.46 14.08 104.28 36.73 87.08 20.74 36.38 33 E11a_E12a KnownJunction 1 68.03 11.17 105.46 22.59 119.07 13.64 24.68 34 ER12a ExonRegion 0 109.03 22.74 140.08 43.15 107.17 29.69 39.40 35 E12a_E13a KnownJunction 0 79.03 11.14 93.82 27.50 116.42 16.67 34.34 36 E12a_E14a KnownJunction 1 27.07 4.76 13.28 12.87 18.47 8.68 6.69 37 ER13a ExonRegion 0 67.54 10.39 85.02 25.35 107.11 21.23 40.82 38 E13a_E14a KnownJunction 0 44.93 9.17 71.88 20.54 67.15 26.80 43.07 39 ER14a ExonRegion 0 68.12 13.93 84.58 33.10 96.54 31.96 48.52 40 E14a_E15a KnownJunction 0 62.94 15.58 73.42 27.31 81.47 22.62 42.38 41 ER15a ExonRegion 0 45.16 14.43 66.44 41.99 97.97 25.36 51.56 42 E15a_E16a KnownJunction 1 30.39 9.85 58.44 35.19 82.92 11.66 38.04 43 ER16a ExonRegion 0 36.73 11.97 58.11 28.62 88.40 21.41 40.60 44 E16_Da KnownBoundary 0 63.94 10.77 58.00 40.42 94.61 25.94 28.45 45 ER16b ExonRegion 0 71.39 17.12 63.43 31.36 85.34 20.41 31.02 46 E16_Db KnownBoundary 0 5358.84 3363.95 3495.18 2861.47 1082.58 2573.29 2635.96 47 ER16c ExonRegion 0 44.25 7.87 37.58 20.31 71.76 18.93 23.31