Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	GPX3	Gene	0	49.92	336.56	25.50	130.05	126.44	579.55	7.35
2	388825	Transcript	0	38.28	342.41	22.29	128.69	122.70	579.02	5.07
3	IG40	Intergenic	0	11.25	2.20	2.17	1.04	0.26	2.03	1.01
4	IG40_AR4	ActiveIntergenicRegion	0	5.32	1.81	10.31	5.36	0.00	5.08	0.00
5	IG40_SR5	SilentIntergenicRegion	0	8.59	4.12	9.54	5.29	0.00	8.10	0.00
6	IG40_AR5	ActiveIntergenicRegion	0	6.35	3.02	7.37	11.78	0.00	9.54	0.50
7	IG40_SR7	SilentIntergenicRegion	0	20.30	3.95	2.75	0.82	0.00	3.83	1.22
8	IG40_SR8	SilentIntergenicRegion	0	27.48	2.65	3.70	0.52	0.05	2.77	1.75
9	IG40_SR9	SilentIntergenicRegion	0	17.83	3.90	2.78	1.00	0.02	2.35	1.62
10	IG40_SR10	SilentIntergenicRegion	0	26.00	3.91	4.18	1.40	0.06	2.55	3.07
11	IG40_AR10	ActiveIntergenicRegion	0	10.34	7.13	1.52	1.01	28.97	4.66	2.68
12	ER1a	ExonRegion	0	4.65	58.68	1.14	24.78	22.21	63.89	0.62
13	E1_Da	NovelBoundary	1	19.81	1.63	0.76	3.49	0.97	4.31	1.86
14	E1a_E2a	KnownJunction	0	6.54	153.79	2.13	53.69	33.89	195.75	0.00
15	I1	Intron	1	41.34	20.42	8.55	7.07	0.38	20.06	7.25
16	I1_AR1	ActiveIntronRegion	1	22.40	7.92	2.73	5.08	0.00	4.72	1.72
17	I1_SR2	SilentIntronRegion	1	37.23	19.82	6.63	8.77	0.16	22.78	6.20
18	I1_AR2	ActiveIntronRegion	1	37.87	11.89	10.06	6.19	0.45	17.73	8.18
19	I1_SR3	SilentIntronRegion	1	52.26	27.17	14.48	12.33	0.49	26.88	11.58
20	I1_AR3	ActiveIntronRegion	1	46.61	27.60	12.09	9.44	0.32	24.75	11.00
21	I1_SR4	SilentIntronRegion	0	27.63	18.38	6.52	6.86	0.11	17.82	5.02
22	I1_AR4	ActiveIntronRegion	1	46.26	21.23	8.27	5.40	0.55	12.76	6.22
23	I1_SR5	SilentIntronRegion	1	45.57	20.09	7.05	4.93	0.58	20.06	5.86
24	E2_Aa	NovelBoundary	1	48.17	24.64	6.39	11.84	0.00	12.65	5.07
25	ER2a	ExonRegion	0	59.05	285.48	23.92	123.30	105.11	466.37	8.96
26	E2_Da	NovelBoundary	1	53.09	17.02	10.79	12.65	0.00	14.31	8.04
27	E2a_E3a	KnownJunction	0	24.17	331.89	12.06	120.39	152.54	544.73	2.97
28	I2	Intron	0	43.77	19.96	9.82	6.70	0.33	10.16	6.05
29	I2_SR1	SilentIntronRegion	1	57.50	23.70	12.61	9.34	0.18	6.67	7.94
30	I2_AR1	ActiveIntronRegion	1	76.84	32.45	19.35	8.02	0.81	7.18	9.73
31	I2_SR2	SilentIntronRegion	0	84.59	29.69	18.18	9.38	1.55	8.53	7.96
32	I2_AR2	ActiveIntronRegion	0	31.96	17.36	7.37	5.44	0.18	10.08	5.55
33	I2_SR3	SilentIntronRegion	1	47.42	13.99	12.57	4.28	0.04	13.31	5.95
34	I2_AR3	ActiveIntronRegion	1	56.39	21.87	9.69	5.63	0.81	13.53	5.77
35	I2_AR4	ActiveIntronRegion	1	38.48	19.24	8.62	5.89	0.55	12.96	4.66
36	E3_Aa	NovelBoundary	0	44.83	27.43	10.04	8.05	1.82	28.89	6.84
37	ER3a	ExonRegion	0	46.01	438.37	27.24	161.78	119.75	730.72	7.68
38	E3_Da	NovelBoundary	1	29.72	24.64	7.83	3.98	2.19	6.91	6.26
39	E3a_E4a	KnownJunction	0	33.35	476.41	31.56	186.79	124.62	903.50	4.73
40	I3	Intron	0	30.58	20.05	8.56	3.20	0.68	7.18	7.64
41	I3_AR1	ActiveIntronRegion	1	30.62	14.29	5.94	3.74	0.83	6.98	5.74
42	I3_SR1	SilentIntronRegion	1	40.90	25.37	9.11	3.04	0.39	7.09	10.01
43	I3_AR2	ActiveIntronRegion	1	40.62	24.30	11.90	3.74	0.81	8.41	10.22
44	I3_SR2	SilentIntronRegion	0	28.17	20.48	9.24	3.16	0.73	7.45	7.67
45	E4_Aa	NovelBoundary	0	29.07	13.82	7.83	10.05	1.08	6.11	2.75
46	ER4a	ExonRegion	1	61.41	494.87	35.35	181.15	159.22	860.07	4.49
47	E4_Da	NovelBoundary	1	39.22	14.79	7.96	2.57	0.00	2.39	3.84
48	E4a_E5a	KnownJunction	0	51.10	486.73	36.49	170.21	216.07	792.68	6.21
49	I4_SR2	SilentIntronRegion	0	20.07	8.37	5.26	2.72	0.00	6.51	1.53
50	E5_Aa	NovelBoundary	0	20.41	26.27	5.89	11.03	0.92	6.81	2.48
51	ER5a	ExonRegion	0	58.22	355.47	30.77	136.11	170.88	653.43	9.97
52	IG41	Intergenic	0	76.47	262.47	25.93	107.60	144.98	494.48	11.63
53	IG41_AR1	ActiveIntergenicRegion	0	100.79	403.64	38.17	164.22	227.80	769.32	16.69
54	IG41_SR1	SilentIntergenicRegion	0	21.89	11.57	3.10	6.44	0.00	17.87	2.15
55	IG41_AR2	ActiveIntergenicRegion	0	23.27	12.97	2.87	6.46	0.37	11.52	1.40
56	IG41_SR2	SilentIntergenicRegion	0	60.88	24.62	8.37	14.49	0.80	17.35	5.45