Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SEPT8	Gene	0	16.89	24.48	47.68	61.29	97.56	102.94	67.10
2	296873	Transcript	0	13.24	26.90	40.43	63.22	93.42	121.60	64.06
3	378721	Transcript	0	0.49	2.34	0.34	0.00	0.93	4.64	1.06
4	378706	Transcript	0	2.67	4.64	2.37	2.18	6.72	7.56	3.21
5	378701	Transcript	0	0	0	0	0	0	0	0
6	378719	Transcript	0	0.14	0.27	0.08	0.14	0.12	0.27	0.15
7	378699	Transcript	0	0	0	0	0	0	0	0
8	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER1b	ExonRegion	0	0.00	0.00	0.43	0.00	0.14	0.25	0.00
10	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	1.01	0.00	0.00
11	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.95	1.66	0.00
12	ER1c	ExonRegion	0	0.00	0.00	1.00	0.00	0.81	2.13	0.32
13	E1_Ae	KnownBoundary	0	0.68	0.00	1.57	1.27	1.11	6.35	3.32
14	ER1d	ExonRegion	0	0.00	0.00	1.43	1.18	1.26	6.67	2.17
15	ER1e	ExonRegion	0	0.93	1.92	3.07	5.21	3.83	12.60	5.20
16	E1a_E2a	KnownJunction	0	0.80	4.52	3.05	14.14	11.57	22.83	7.44
17	ER2a	ExonRegion	0	3.37	22.50	14.96	36.32	24.61	60.48	26.29
18	E2a_E3a	KnownJunction	0	11.77	33.13	32.09	69.41	54.59	98.68	52.95
19	ER3a	ExonRegion	0	12.10	37.90	41.98	79.14	66.42	131.46	83.48
20	E3_Da	NovelBoundary	0	0.83	11.77	4.18	11.00	2.17	23.21	0.89
21	E3a_E4a	KnownJunction	0	16.12	18.89	50.67	57.62	66.05	95.25	74.19
22	E3a_E4b	KnownJunction	0	7.41	7.25	13.25	30.13	24.00	41.16	24.18
23	E4_Ab	NovelBoundary	1	7.13	8.38	31.31	33.54	14.38	32.51	45.73
24	ER4a	ExonRegion	0	17.02	24.47	59.13	73.75	60.74	106.66	95.21
25	ER4b	ExonRegion	0	26.69	33.28	66.37	78.60	118.88	136.13	121.60
26	E4a_E5a	KnownJunction	0	28.47	55.12	73.13	94.44	142.17	119.71	134.06
27	ER5a	ExonRegion	0	32.98	56.80	67.32	103.17	135.65	153.62	145.10
28	E5a_E6a	KnownJunction	0	28.32	57.82	64.13	87.75	146.73	149.68	149.45
29	E5a_E7a	NovelJunction	0	0.00	1.63	1.61	11.76	1.91	6.41	0.66
30	ER6a	ExonRegion	0	23.56	51.15	50.98	93.74	119.16	137.92	119.41
31	E6a_E7a	KnownJunction	0	13.20	41.93	42.84	102.76	141.91	145.68	102.30
32	ER7a	ExonRegion	0	16.72	37.75	44.11	86.28	102.40	127.79	100.42
33	E7a_E8a	KnownJunction	0	10.92	39.43	45.91	86.29	99.20	120.04	79.04
34	ER8a	ExonRegion	0	19.82	33.14	50.20	91.85	93.11	124.42	89.23
35	E8a_E9a	KnownJunction	0	14.24	34.02	61.30	90.51	105.67	125.02	90.42
36	ER9a	ExonRegion	0	19.21	33.60	49.40	82.92	90.67	110.03	94.19
37	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	E9a_E10b	KnownJunction	0	15.66	31.92	49.38	58.27	92.56	92.89	83.28
39	E9a_E10c	KnownJunction	0	0.00	0.00	0.00	1.63	0.00	5.04	0.77
40	E9a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	E9a_E12a	KnownJunction	0	0.68	3.73	0.69	0.00	1.24	7.69	1.62
42	I9	Intron	0	2.66	7.52	4.82	7.16	7.71	12.12	5.44
43	I9_SR1	SilentIntronRegion	0	2.06	7.06	7.65	13.08	5.62	10.14	4.15
44	I9_AR2	ActiveIntronRegion	0	2.86	9.37	5.80	10.14	8.81	13.34	5.29
45	I9_AR3	ActiveIntronRegion	0	1.45	11.01	2.03	6.45	8.10	10.17	4.56
46	I9_AR4	ActiveIntronRegion	0	1.62	12.26	3.82	6.74	6.22	7.94	6.73
47	I9_AR5	ActiveIntronRegion	0	1.73	9.62	3.95	13.08	9.14	11.83	4.32
48	I9_AR10	ActiveIntronRegion	0	3.09	7.50	2.84	2.71	9.40	12.44	6.46
49	E10_Aa	NovelBoundary	0	7.08	12.16	6.58	3.01	13.49	11.52	7.54
50	ER10a	ExonRegion	0	5.35	9.28	4.74	4.36	13.43	15.13	6.42
51	E10_Ab	KnownBoundary	0	1.62	11.72	3.98	5.01	5.16	11.98	1.20
52	ER10b	ExonRegion	0	14.84	30.57	43.43	58.68	87.03	108.88	76.65
53	E10_Ac	KnownBoundary	0	27.24	28.98	73.73	46.14	66.58	127.67	77.05
54	ER10c	ExonRegion	0	24.00	23.69	71.53	50.59	95.82	111.16	73.44
55	E10_Da	KnownBoundary	0	23.62	27.09	94.10	48.79	144.89	91.49	77.09
56	ER10d	ExonRegion	0	24.47	34.02	95.73	56.29	123.97	102.98	94.36
57	E10_Db	KnownBoundary	0	20.90	28.03	80.43	61.63	116.37	91.20	84.11
58	ER10e	ExonRegion	0	23.13	26.28	68.52	79.98	151.54	129.15	80.16
59	E10_Dc	KnownBoundary	0	16.36	32.16	66.88	61.31	166.16	184.49	64.62
60	ER10f	ExonRegion	0	10.82	21.88	31.49	68.16	94.29	150.31	44.84
61	ER11a	ExonRegion	0	0.29	0.54	0.15	0.28	0.24	0.54	0.30
62	ER12a	ExonRegion	0	0.30	0.95	0.00	0.01	0.61	1.60	0.50