Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	GTF2H2	Gene	0	36.53	14.78	47.31	12.95	110.36	7.56	27.41
2	274400	Transcript	0	25.02	12.95	26.29	12.37	52.64	6.78	15.46
3	330280	Transcript	0	3.72	1.99	5.91	1.95	16.31	0.63	5.45
4	ER1a	ExonRegion	0	2.16	0.06	6.58	4.57	29.42	0.00	4.27
5	ER1b	ExonRegion	0	6.77	5.13	18.45	7.02	61.78	2.52	12.92
6	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER2a	ExonRegion	0	11.17	5.96	17.73	5.85	48.94	1.90	16.35
9	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER3a	ExonRegion	0	20.32	11.15	47.13	15.68	76.64	3.94	24.72
11	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER4a	ExonRegion	1	6.58	4.14	18.37	6.60	64.38	1.19	21.38
13	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER5a	ExonRegion	0	8.72	2.76	17.50	2.97	58.97	2.42	12.98
15	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER6a	ExonRegion	0	33.31	1.87	43.50	2.49	187.26	3.83	21.58
17	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER7a	ExonRegion	0	86.92	9.84	95.50	14.99	181.20	9.76	45.09
19	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER8a	ExonRegion	0	94.03	31.52	119.54	26.55	44.57	12.97	58.70
21	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER9a	ExonRegion	0	124.12	37.25	173.81	27.40	422.22	21.67	84.67
23	E9_Da	NovelBoundary	0	20.14	4.73	24.96	4.33	53.83	1.66	23.19
24	E9a_E10a	KnownJunction	1	81.10	18.07	120.09	5.63	294.15	13.11	63.86
25	I9_AR1	ActiveIntronRegion	1	6.67	0.61	10.28	1.25	20.41	0.92	16.55
26	I9_AR2	ActiveIntronRegion	1	5.43	1.14	2.32	0.58	11.99	0.29	7.44
27	ER10a	ExonRegion	0	85.97	22.27	110.95	14.05	202.62	11.36	67.36
28	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER11a	ExonRegion	0	80.05	22.47	101.99	21.50	171.90	12.72	54.76
30	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER12a	ExonRegion	0	76.50	42.76	78.81	32.24	315.20	16.47	59.67
32	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER13a	ExonRegion	0	13.62	20.22	10.03	14.46	8.58	8.89	10.45
34	E13_Da	NovelBoundary	0	10.20	1.29	6.44	1.54	7.24	0.00	8.15
35	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER14a	ExonRegion	0	20.04	15.84	15.32	18.63	108.76	8.85	13.06
37	E14a_E15a	KnownJunction	0	0.00	16.29	0.00	15.12	307.11	6.91	0.00
38	ER15a	ExonRegion	0	0.00	5.90	0.00	6.51	56.96	2.63	0.00
39	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER16a	ExonRegion	0	0.00	4.01	0.68	0.03	8.85	1.38	0.00
41	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER17a	ExonRegion	0	4.66	0.53	14.02	0.07	21.60	0.67	6.48
43	E17_Da	KnownBoundary	1	23.98	3.52	54.88	1.33	112.96	0.00	38.37
44	ER17b	ExonRegion	0	72.89	38.78	72.30	32.54	128.48	20.34	42.12
45	IG31_AR4	ActiveIntergenicRegion	0	3.51	2.02	5.36	3.66	15.34	1.36	21.06