Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PPA2	Gene	0	95.89	94.47	90.48	42.17	130.35	30.37	198.98
2	310267	Transcript	1	4.24	25.27	1.48	6.47	2.01	2.04	1.85
3	354147	Transcript	0	0.00	10.59	0.00	8.99	1.96	1.58	0.00
4	357415	Transcript	0	1.59	0.61	1.70	0.62	4.74	0.00	3.58
5	341695	Transcript	0	0	0	0	0	0	0	0
6	380004	Transcript	0	2.54	0.00	2.95	0.00	1.94	2.39	5.29
7	348706	Transcript	1	11.35	4.15	21.14	5.01	11.69	2.52	18.50
8	351450	Transcript	0	0.78	0.00	0.00	1.38	1.01	0.00	0.00
9	ER1a	ExonRegion	0	20.48	81.79	18.43	41.40	30.44	20.37	53.50
10	E1a_E2a	KnownJunction	1	1.59	10.17	0.00	2.82	0.00	0.00	0.89
11	E1a_E3a	KnownJunction	0	26.54	131.25	22.86	38.44	31.81	29.45	103.67
12	E1a_E11a	KnownJunction	0	0.00	10.59	0.00	8.99	1.96	1.58	0.00
13	ER2a	ExonRegion	1	6.89	40.38	2.97	10.13	4.03	4.07	2.81
14	E2_Da	NovelBoundary	0	16.51	70.91	9.67	16.25	4.20	14.77	7.85
15	I2_AR1	ActiveIntronRegion	1	33.84	43.50	16.44	15.00	16.30	8.40	5.34
16	I2_AR2	ActiveIntronRegion	1	11.31	19.96	6.39	9.80	9.14	0.00	2.70
17	ER3a	ExonRegion	0	120.46	168.44	89.90	78.65	98.48	42.08	278.29
18	E3a_E4a	KnownJunction	0	1.03	0.00	0.73	0.00	2.19	0.00	0.73
19	E3a_E6a	KnownJunction	0	188.78	161.33	143.06	108.50	145.03	42.50	344.50
20	E3a_E10a	KnownJunction	0	0.78	0.00	0.00	1.38	1.01	0.00	0.00
21	ER4a	ExonRegion	0	2.24	0.00	1.31	0.00	3.83	0.00	2.81
22	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER5a	ExonRegion	0	3.07	2.43	4.74	2.49	12.96	0.00	10.79
24	ER6a	ExonRegion	0	210.91	209.33	188.96	112.67	230.29	60.70	463.76
25	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E6a_E8a	KnownJunction	0	2.54	0.00	2.95	0.00	1.94	2.39	5.29
27	ER7a	ExonRegion	0	151.40	249.77	146.80	90.82	244.61	67.66	417.17
28	E7a_E8a	KnownJunction	0	139.01	212.85	137.67	79.57	238.39	61.91	331.10
29	ER8a	ExonRegion	0	272.41	250.38	241.24	108.60	302.84	81.52	524.55
30	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	E8a_E10a	KnownJunction	0	11.35	4.15	21.14	5.01	11.69	2.52	18.50
32	ER9a	ExonRegion	0	209.61	189.48	197.76	76.87	286.56	56.85	511.33
33	E9a_E10a	KnownJunction	0	230.67	158.21	201.00	70.33	256.16	57.54	429.54
34	E10_Aa	NovelBoundary	1	103.54	1.63	81.08	0.00	0.00	0.00	0.72
35	ER10a	ExonRegion	0	241.38	155.61	238.12	75.36	331.26	58.65	457.93
36	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	I10_AR1	ActiveIntronRegion	0	27.56	24.95	26.50	17.07	8.79	13.01	13.05
38	ER11a	ExonRegion	0	208.40	126.68	210.35	58.30	328.33	54.39	431.03
39	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER12a	ExonRegion	0	187.57	167.04	203.02	82.34	237.78	59.90	450.93
41	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER13a	ExonRegion	0	163.48	165.65	164.05	79.16	219.86	55.59	408.74
43	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER14a	ExonRegion	0	147.35	157.57	147.36	72.29	208.99	59.78	350.42
45	E14a_E15a	KnownJunction	0	121.25	114.12	128.31	47.60	216.24	44.59	249.93
46	ER15a	ExonRegion	0	33.08	24.74	29.26	11.99	58.24	10.89	46.80