Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CEP135	Gene	0	40.26	16.85	44.48	22.68	52.47	21.75	11.88
2	257287	Transcript	0	49.60	19.56	52.94	27.69	59.64	23.90	13.18
3	ER1a	ExonRegion	0	4.82	4.04	4.32	4.72	5.26	3.72	1.21
4	E1a_E2a	KnownJunction	0	5.11	7.86	4.34	4.09	1.08	5.20	0.89
5	ER2a	ExonRegion	0	18.21	14.29	26.56	10.37	12.78	12.36	6.61
6	E2a_E3a	KnownJunction	0	19.18	15.47	21.81	13.41	27.34	17.04	7.88
7	ER3a	ExonRegion	0	27.72	26.89	53.26	36.73	30.06	28.06	12.47
8	E3a_E4a	KnownJunction	1	26.44	30.34	62.94	37.66	51.02	27.82	14.37
9	ER4a	ExonRegion	0	28.19	30.61	53.86	32.66	39.33	23.72	13.30
10	E4a_E5a	KnownJunction	0	28.32	31.05	46.30	31.62	39.26	31.49	13.26
11	ER5a	ExonRegion	0	23.03	21.55	42.49	33.62	44.49	23.92	12.48
12	E5a_E6a	KnownJunction	0	14.84	14.32	27.62	26.90	24.34	28.41	8.51
13	ER6a	ExonRegion	0	21.37	18.85	32.59	25.00	34.47	23.31	12.12
14	E6a_E7a	KnownJunction	0	18.29	21.52	38.00	30.80	29.62	15.46	8.47
15	ER7a	ExonRegion	0	29.56	17.67	36.02	27.47	34.89	14.85	10.96
16	E7a_E8a	KnownJunction	0	27.51	18.23	28.77	28.07	32.55	18.09	13.21
17	ER8a	ExonRegion	0	53.37	22.61	57.54	41.15	52.20	25.26	13.53
18	E8_Da	NovelBoundary	0	14.54	4.07	15.63	8.02	27.11	2.79	1.68
19	E8a_E9a	KnownJunction	0	38.17	12.24	51.07	17.23	41.22	16.24	9.59
20	I8_AR1	ActiveIntronRegion	0	6.12	2.11	7.13	1.83	16.08	2.45	2.85
21	ER9a	ExonRegion	0	59.45	18.19	69.42	30.36	57.16	13.02	12.28
22	E9a_E10a	KnownJunction	1	80.50	23.15	85.16	45.08	58.35	14.20	13.61
23	ER10a	ExonRegion	0	61.66	28.82	75.89	45.88	61.58	25.88	16.49
24	E10a_E11a	KnownJunction	0	63.47	24.43	66.41	33.97	56.83	20.61	12.27
25	E10a_E12a	NovelJunction	1	31.53	4.57	16.70	11.43	7.49	4.10	2.24
26	E11_Aa	NovelBoundary	1	29.41	1.31	29.14	0.00	0.85	0.99	1.56
27	ER11a	ExonRegion	0	47.30	20.19	55.58	25.75	53.70	19.15	14.38
28	E11a_E12a	KnownJunction	0	59.77	11.48	70.96	19.88	102.49	15.06	13.83
29	ER12a	ExonRegion	0	61.14	12.43	78.44	27.80	54.33	28.58	15.72
30	E12a_E13a	KnownJunction	0	93.21	15.79	112.23	34.24	71.12	38.19	17.00
31	ER13a	ExonRegion	0	53.82	18.07	71.77	26.80	58.04	23.81	12.83
32	E13a_E14a	KnownJunction	1	46.97	30.40	66.56	26.55	44.79	15.87	6.88
33	ER14a	ExonRegion	0	41.61	22.30	57.20	22.03	55.62	20.20	12.08
34	E14a_E15a	KnownJunction	0	39.14	19.55	45.32	19.94	56.59	23.24	13.53
35	ER15a	ExonRegion	0	42.94	13.36	53.50	22.91	47.46	33.17	15.04
36	E15a_E16a	KnownJunction	0	30.04	15.61	35.34	17.39	44.05	29.77	8.10
37	E16_Aa	NovelBoundary	1	12.38	1.63	19.54	0.00	0.00	1.29	0.82
38	ER16a	ExonRegion	0	42.63	12.20	55.29	17.30	51.95	28.96	14.30
39	E16_Da	NovelBoundary	0	12.52	4.28	9.47	3.66	2.21	1.66	4.41
40	E16a_E17a	KnownJunction	1	27.69	3.81	30.41	10.92	46.73	17.37	9.39
41	E17_Aa	NovelBoundary	0	6.66	1.05	13.49	1.33	1.94	6.62	2.42
42	ER17a	ExonRegion	0	46.01	12.92	44.80	23.01	54.13	22.08	12.92
43	E17a_E18a	KnownJunction	0	45.43	11.24	44.76	30.10	50.51	21.39	9.95
44	ER18a	ExonRegion	0	40.19	24.47	45.18	29.82	54.58	27.17	10.44
45	E18a_E19a	KnownJunction	0	33.25	29.84	32.00	23.79	56.85	21.23	10.18
46	ER19a	ExonRegion	0	47.62	21.73	44.51	25.27	64.62	23.89	10.48
47	E19a_E20a	KnownJunction	1	61.57	19.73	66.48	31.89	85.62	38.08	7.85
48	ER20a	ExonRegion	0	57.94	24.51	62.62	32.14	78.89	31.90	13.18
49	E20a_E21a	KnownJunction	0	60.70	17.60	58.75	22.84	62.61	31.92	12.14
50	ER21a	ExonRegion	0	40.50	19.48	49.30	21.42	61.71	34.34	13.50
51	E21a_E22a	KnownJunction	1	36.18	10.27	52.65	23.41	64.99	38.35	11.29
52	ER22a	ExonRegion	0	39.12	14.88	49.15	29.35	55.50	26.48	15.03
53	E22a_E23a	KnownJunction	0	47.93	12.14	43.21	29.15	55.86	22.43	13.03
54	ER23a	ExonRegion	0	87.90	22.56	65.52	34.74	149.12	34.90	21.91
55	E23a_E24a	KnownJunction	0	185.02	34.39	102.36	63.45	123.29	46.93	41.46
56	ER24a	ExonRegion	0	123.93	32.26	79.63	52.11	136.12	32.56	23.52
57	E24a_E25a	KnownJunction	0	155.25	30.29	95.92	52.75	165.68	24.31	36.27
58	ER25a	ExonRegion	0	94.02	22.94	58.39	27.23	181.68	23.97	22.90
59	E25a_E26a	KnownJunction	0	62.72	27.03	57.44	18.88	79.99	17.77	10.58
60	ER26a	ExonRegion	0	28.69	11.85	30.36	12.82	39.17	17.05	8.86