Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PIGG	Gene	0	78.10	78.25	94.13	70.24	44.98	39.05	97.46
2	310340	Transcript	0	11.58	8.40	10.76	9.69	6.97	4.66	23.83
3	296306	Transcript	0	2.14	0.81	4.67	2.52	0.54	0.00	0.27
4	383028	Transcript	0	47.30	35.83	45.20	54.94	26.38	12.99	49.12
5	ER1a	ExonRegion	0	0.00	0.00	0.08	0.00	0.00	0.00	0.00
6	ER1b	ExonRegion	0	7.96	3.27	8.17	6.36	5.08	2.23	13.27
7	E1_Da	KnownBoundary	0	23.92	8.62	22.91	11.35	18.10	14.50	39.37
8	E1a_E2a	KnownJunction	0	4.27	1.63	9.34	5.04	1.08	0.00	0.54
9	ER1c	ExonRegion	0	22.39	16.98	20.20	16.57	10.89	6.84	40.65
10	E1_Ac	KnownBoundary	1	28.36	36.10	33.67	34.65	10.74	8.95	48.11
11	ER1d	ExonRegion	0	15.87	22.80	17.75	15.76	5.06	8.80	27.99
12	E1_Db	NovelBoundary	0	13.95	25.88	10.84	24.17	5.23	12.38	15.95
13	E1b_E2a	KnownJunction	0	45.15	47.81	56.94	38.74	10.86	15.95	71.90
14	ER2a	ExonRegion	0	70.88	106.52	109.20	86.24	34.97	47.03	102.93
15	E2a_E3a	KnownJunction	0	83.62	83.10	124.76	83.96	41.13	45.29	110.82
16	E2a_E5a	KnownJunction	0	0.00	2.55	0.00	0.00	0.00	0.00	0.00
17	ER3a	ExonRegion	0	144.63	106.33	192.23	91.82	56.94	55.16	131.06
18	E3a_E4a	KnownJunction	0	224.66	124.13	238.61	82.90	82.21	61.85	158.42
19	ER4a	ExonRegion	0	171.12	124.81	188.51	104.08	61.05	53.57	146.78
20	E4a_E5a	KnownJunction	0	111.47	93.13	137.51	87.48	52.58	31.54	112.90
21	ER5a	ExonRegion	0	100.87	87.62	120.12	94.24	48.42	44.27	120.01
22	E5_Da	NovelBoundary	1	49.04	3.89	59.25	4.71	3.20	0.00	6.54
23	E5a_E6a	KnownJunction	0	92.96	81.05	126.76	102.24	43.50	34.01	120.68
24	ER6a	ExonRegion	0	122.74	91.52	150.43	86.63	60.27	41.74	130.12
25	E6_Da	NovelBoundary	0	23.10	20.28	17.82	2.63	7.10	12.11	15.62
26	E6a_E7a	KnownJunction	0	137.94	88.59	175.61	91.03	70.24	36.13	111.23
27	E6a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER7a	ExonRegion	0	144.76	106.73	146.90	99.67	62.29	31.47	130.95
29	E7_Da	NovelBoundary	1	81.35	60.37	70.96	67.54	40.99	16.32	76.96
30	E7a_E8a	KnownJunction	0	12.35	8.22	12.00	12.49	10.00	7.13	30.84
31	E7b_E8a	KnownJunction	1	64.74	51.05	63.99	86.58	38.04	18.44	70.31
32	ER7b	ExonRegion	1	77.16	53.91	71.61	78.25	41.10	20.54	77.04
33	ER8a	ExonRegion	0	85.29	71.34	86.66	77.16	49.46	37.18	112.65
34	E8_Da	NovelBoundary	0	26.99	35.65	45.50	28.85	23.33	15.30	28.03
35	E8a_E9a	KnownJunction	0	32.11	30.55	32.09	38.33	21.97	14.18	71.59
36	I8	Intron	0	19.08	24.31	26.67	22.64	16.62	13.80	17.76
37	I8_AR1	ActiveIntronRegion	0	27.33	33.56	37.60	32.68	19.47	19.85	22.75
38	I8_SR1	SilentIntronRegion	0	12.96	11.98	19.39	10.84	19.41	8.42	12.00
39	I8_AR2	ActiveIntronRegion	0	10.82	11.77	10.58	3.74	18.81	3.68	11.73
40	I8_SR2	SilentIntronRegion	0	10.57	10.93	8.21	2.49	15.89	2.76	10.12
41	I8_AR4	ActiveIntronRegion	0	4.54	9.70	7.53	7.27	10.26	4.44	9.41
42	E9_Aa	NovelBoundary	0	2.49	5.02	5.85	8.97	25.93	3.30	16.85
43	ER9a	ExonRegion	0	34.36	60.00	40.59	57.34	22.61	28.04	73.67
44	E9a_E10a	KnownJunction	0	32.71	45.55	32.38	42.18	8.14	40.33	57.41
45	I9	Intron	0	8.96	6.44	7.11	4.05	12.34	1.95	9.65
46	I9_AR1	ActiveIntronRegion	0	10.30	3.06	9.60	4.31	11.94	2.38	9.13
47	I9_SR1	SilentIntronRegion	0	8.25	5.00	9.56	4.55	11.22	2.92	9.52
48	I9_AR2	ActiveIntronRegion	0	14.75	11.42	11.08	7.22	19.26	3.72	15.51
49	I9_AR3	ActiveIntronRegion	0	6.88	5.41	2.83	0.62	10.58	0.00	6.49
50	ER10a	ExonRegion	0	32.34	48.54	33.19	45.33	23.31	31.29	42.03
51	E10a_E11a	KnownJunction	0	26.64	46.00	44.65	38.04	22.80	17.18	34.14
52	E10a_E12a	NovelJunction	1	0.85	8.49	0.00	0.00	8.35	1.98	9.24
53	I10	Intron	1	12.89	12.32	9.73	4.36	13.03	4.43	25.27
54	I10_AR1	ActiveIntronRegion	1	24.86	12.85	18.81	8.42	12.68	8.16	29.02
55	I10_SR1	SilentIntronRegion	1	9.76	12.24	8.16	4.14	7.78	1.52	20.61
56	I10_AR2	ActiveIntronRegion	1	14.04	12.04	8.81	3.74	15.36	6.89	24.29
57	I10_SR2	SilentIntronRegion	1	10.71	21.77	10.03	4.32	20.31	7.83	41.95
58	I10_AR3	ActiveIntronRegion	1	11.89	8.86	8.97	4.01	11.22	2.14	20.79
59	E11_Aa	NovelBoundary	1	26.77	12.53	17.62	4.44	18.88	5.44	34.04
60	ER11a	ExonRegion	0	79.64	73.75	102.31	76.56	57.35	42.05	103.92
61	E11_Da	NovelBoundary	0	48.42	22.51	43.82	18.64	31.37	14.15	62.96
62	E11a_E12a	KnownJunction	0	70.15	47.08	95.99	68.95	44.68	32.11	75.50
63	I11	Intron	1	10.89	20.88	12.11	14.58	18.60	11.30	37.17
64	I11_AR1	ActiveIntronRegion	1	10.89	20.89	12.12	14.60	18.61	11.31	37.20
65	E12_Aa	NovelBoundary	1	12.68	38.30	15.98	28.55	35.55	21.20	63.65
66	ER12a	ExonRegion	0	65.42	94.68	89.12	69.06	78.96	48.12	124.41
67	E12a_E13a	KnownJunction	0	84.58	102.93	83.78	68.11	96.91	57.16	104.09
68	I12_AR2	ActiveIntronRegion	1	9.86	24.53	8.85	6.23	1.24	6.99	13.03
69	I12_AR3	ActiveIntronRegion	0	7.68	17.01	8.13	9.73	1.70	6.99	13.90
70	ER13a	ExonRegion	0	51.57	83.93	70.63	58.67	55.71	56.24	89.67
71	ER13b	ExonRegion	0	2.15	7.53	9.21	2.99	5.02	2.45	9.44
72	IG8_AR1	ActiveIntergenicRegion	0	13.91	7.68	16.49	4.47	7.73	3.87	6.14