Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	HES1	Gene	0	2538.31	1643.50	2077.70	696.78	45.92	2731.41	165.17
2	232424	Transcript	0	4115.90	2589.65	3453.91	1014.20	79.80	4179.13	244.18
3	ER1a	ExonRegion	0	3678.45	1695.37	3087.79	772.29	58.82	3033.54	189.46
4	E1a_E2a	KnownJunction	0	2890.46	2538.21	2866.85	905.14	68.28	4078.52	189.50
5	ER2a	ExonRegion	0	5267.65	3279.00	4720.87	1236.25	96.74	5568.36	287.75
6	E2_Da	NovelBoundary	0	48.37	38.04	90.35	15.33	0.00	25.35	53.47
7	E2a_E3a	KnownJunction	0	6562.90	3410.77	5186.41	1335.02	125.59	5489.88	330.43
8	ER3a	ExonRegion	0	4952.30	3101.89	4008.80	1236.14	112.26	4748.05	322.54
9	E3a_E4a	KnownJunction	0	3883.11	2795.31	3084.81	1056.77	67.78	4218.77	262.12
10	I3	Intron	0	66.19	41.65	87.04	69.93	0.33	92.12	41.11
11	I3_AR1	ActiveIntronRegion	0	72.65	44.36	95.13	73.88	0.39	96.66	43.13
12	I3_AR2	ActiveIntronRegion	1	50.72	39.28	63.00	61.72	0.00	112.18	41.43
13	E4_Aa	NovelBoundary	0	62.90	63.37	96.28	72.69	0.00	148.36	64.39
14	ER4a	ExonRegion	0	1576.43	1306.99	1221.82	557.78	29.11	2116.82	127.47
15	IG29	Intergenic	0	2.38	2.29	6.56	9.83	0.22	13.11	0.66
16	IG29_AR1	ActiveIntergenicRegion	0	5.95	2.01	8.46	4.38	0.16	14.36	2.37
17	IG29_SR1	SilentIntergenicRegion	0	10.79	5.49	21.18	14.64	1.51	30.86	3.81
18	IG29_SR2	SilentIntergenicRegion	0	8.74	7.59	26.18	21.27	0.17	22.25	3.15
19	IG29_SR3	SilentIntergenicRegion	0	2.04	2.06	5.67	9.38	0.22	12.63	0.52