Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 MME Gene 0 0.06 0.03 309.23 10.66 50.84 51.71 301.52 2 382989 Transcript 0 0.00 0.00 0.00 1.34 0.00 0.00 0.77 3 360490 Transcript 0 0 0 0 0 0 0 0 4 404362 Transcript 0 0.04 0.06 272.38 7.85 48.38 41.49 219.47 5 IG32_AR18 ActiveIntergenicRegion 0 0.00 0.00 8.05 1.72 2.16 3.25 11.33 6 IG32_AR19 ActiveIntergenicRegion 0 0.00 0.00 14.30 2.38 2.22 5.72 38.31 7 IG32_AR20 ActiveIntergenicRegion 0 0.00 0.00 11.05 1.99 4.13 2.22 17.08 8 ER1a ExonRegion 0 0.00 0.00 32.88 1.06 9.06 0.61 41.27 9 E1a_E2a KnownJunction 0 0.00 0.00 48.37 2.93 2.84 2.65 76.85 10 E2_Ab NovelBoundary 0 0.00 0.00 108.08 11.41 11.66 33.53 130.93 11 ER2a ExonRegion 0 0.00 0.00 94.65 11.00 7.88 6.58 130.01 12 ER2b ExonRegion 0 0.00 0.00 247.60 18.78 46.66 67.16 399.38 13 E2a_E3a KnownJunction 0 0.00 0.00 247.21 13.03 62.45 89.03 336.13 14 ER3a ExonRegion 0 0.00 0.00 395.08 17.46 63.84 104.14 494.44 15 E3a_E4a KnownJunction 0 0.00 0.00 0.00 1.68 0.00 0.00 0.87 16 E3a_E5a KnownJunction 0 0.00 0.00 346.83 13.63 61.32 75.79 418.26 17 ER4a ExonRegion 0 0.00 0.00 0.00 1.01 0.00 0.00 0.66 18 ER5a ExonRegion 0 0.00 0.00 365.50 17.05 54.69 80.76 434.28 19 E5a_E6a KnownJunction 0 0.00 0.00 437.42 17.61 59.02 78.90 381.43 20 ER6a ExonRegion 0 0.00 0.00 417.79 15.66 55.55 75.04 401.73 21 E6a_E7a KnownJunction 0 0.00 0.00 386.45 14.71 46.11 69.20 405.78 22 ER7a ExonRegion 0 0.00 0.00 390.93 13.29 44.25 68.96 408.28 23 E7a_E8a KnownJunction 0 0.00 0.00 406.29 14.79 55.97 70.27 375.57 24 ER8a ExonRegion 0 0.00 0.00 455.61 18.98 55.34 77.32 432.21 25 E8a_E9a KnownJunction 0 0.00 0.00 442.97 18.56 62.87 69.76 433.28 26 ER9a ExonRegion 0 0.00 0.00 367.72 19.35 43.07 58.36 384.70 27 E9a_E10a KnownJunction 0 0.00 0.00 381.32 22.16 34.53 56.98 344.07 28 ER10a ExonRegion 0 0.00 0.00 445.37 21.57 52.53 68.27 426.35 29 E10a_E11a KnownJunction 1 0.00 0.00 532.95 28.82 67.04 62.18 475.98 30 ER11a ExonRegion 0 0.00 0.00 492.91 18.22 63.91 70.27 461.89 31 E11a_E12a KnownJunction 0 0.00 0.00 412.70 11.13 53.02 39.82 359.83 32 E11a_E13a NovelJunction 0 0.00 0.00 4.61 1.11 0.88 8.15 5.63 33 E11a_E14a NovelJunction 0 0.00 0.00 18.67 6.64 1.18 10.96 11.59 34 ER12a ExonRegion 0 0.33 0.00 556.41 14.36 73.19 68.52 519.95 35 E12a_E13a KnownJunction 0 0.80 0.00 512.60 15.04 78.43 59.07 432.68 36 ER13a ExonRegion 0 0.22 0.00 432.35 11.30 59.02 65.71 459.01 37 E13a_E14a KnownJunction 0 0.68 0.00 396.10 14.68 51.78 53.95 443.70 38 ER14a ExonRegion 0 0.39 0.00 351.83 12.21 55.52 72.90 429.60 39 E14a_E15a KnownJunction 0 0.00 0.00 328.68 9.05 43.06 81.58 449.81 40 ER15a ExonRegion 0 0.00 0.00 324.03 15.54 40.87 80.66 413.21 41 E15a_E16a KnownJunction 0 0.00 0.00 290.08 7.40 69.64 59.44 368.58 42 ER16a ExonRegion 0 0.00 0.00 366.65 8.42 64.77 64.31 526.94 43 E16a_E17a KnownJunction 0 0.00 0.00 415.13 10.76 50.81 68.12 597.75 44 ER17a ExonRegion 0 0.00 0.00 367.22 14.03 44.17 63.86 434.11 45 E17a_E18a KnownJunction 0 0.00 0.00 311.13 11.00 59.04 53.52 358.23 46 ER18a ExonRegion 0 0.00 0.00 360.23 10.97 76.19 62.88 539.39 47 E18a_E19a KnownJunction 0 0.00 0.00 346.73 16.15 86.08 63.52 595.64 48 ER19a ExonRegion 0 0.00 0.00 337.60 16.78 65.85 59.81 443.20 49 E19a_E20a KnownJunction 0 0.00 0.00 284.19 16.28 62.24 65.58 366.74 50 ER20a ExonRegion 0 0.26 0.00 297.09 15.38 61.23 60.71 400.15 51 E20a_E21a KnownJunction 0 0.00 0.00 277.75 14.17 60.42 70.30 306.52 52 ER21a ExonRegion 0 0.06 0.00 286.27 12.09 61.00 58.44 361.74 53 E21a_E22a KnownJunction 0 0.00 0.00 279.46 5.91 65.95 52.07 372.62 54 ER22a ExonRegion 0 0.12 0.00 369.87 12.76 71.01 68.27 436.61 55 E22a_E23a KnownJunction 0 0.77 0.00 415.68 12.81 69.64 78.20 431.23 56 ER23a ExonRegion 0 0.36 0.00 357.24 11.45 42.44 76.90 388.03 57 E23a_E24a KnownJunction 0 0.00 0.00 329.47 14.60 39.35 78.55 391.55 58 ER24a ExonRegion 0 0.00 0.00 323.22 10.72 61.61 59.61 385.49 59 E24_Da KnownBoundary 0 0.00 0.00 322.34 9.51 75.57 56.44 362.66 60 ER24b ExonRegion 0 0.04 0.06 272.38 7.85 48.38 41.49 219.47 61 IG33_SR3 SilentIntergenicRegion 0 0.01 0.00 0.08 0.00 8.80 0.22 0.00 62 IG33_AR4 ActiveIntergenicRegion 0 0.17 0.00 0.15 0.00 31.66 0.00 0.00 63 IG33_AR5 ActiveIntergenicRegion 0 0.15 0.00 0.00 0.00 28.85 0.19 0.00 64 IG33_AR6 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 23.76 1.23 0.00 65 IG33_SR4 SilentIntergenicRegion 0 0.11 0.00 0.00 0.00 32.15 0.20 0.00 66 IG33_AR7 ActiveIntergenicRegion 0 0.14 0.00 0.00 0.00 22.59 0.00 0.47 67 IG33_AR8 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 19.98 0.00 0.00