Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DHX36	Gene	0	180.55	125.11	362.40	248.27	393.64	250.55	154.24
2	392856	Transcript	0	1.34	0.48	2.69	1.60	3.47	1.18	1.35
3	329463	Transcript	0	0	0	0	0	0	0	0
4	308361	Transcript	0	1.02	12.40	2.66	13.41	0.00	18.01	0.59
5	ER1a	ExonRegion	0	42.04	52.78	55.52	77.35	64.32	84.99	34.17
6	E1a_E2a	KnownJunction	0	58.95	156.66	179.63	184.03	166.30	205.61	82.06
7	ER2a	ExonRegion	0	123.40	164.15	288.14	237.73	206.22	243.18	112.04
8	E2a_E3a	KnownJunction	0	195.66	184.64	427.46	247.75	280.00	255.96	143.43
9	ER3a	ExonRegion	0	197.00	140.05	526.94	251.46	319.48	285.76	157.07
10	E3a_E4a	KnownJunction	0	123.39	94.84	342.80	152.25	248.19	211.53	122.71
11	I3_SR1	SilentIntronRegion	0	45.31	24.31	54.63	21.91	16.42	18.42	9.25
12	ER4a	ExonRegion	0	140.74	99.65	423.17	194.72	287.79	232.72	154.19
13	E4a_E5a	KnownJunction	0	110.09	76.42	336.27	177.50	320.60	172.16	122.09
14	ER5a	ExonRegion	0	136.00	128.31	378.76	241.27	345.93	221.50	180.66
15	E5a_E6a	KnownJunction	0	144.22	136.59	359.46	244.77	419.91	195.18	182.04
16	E5a_E7a	NovelJunction	1	1.79	6.80	0.00	9.62	0.00	0.00	0.00
17	ER6a	ExonRegion	0	147.85	132.01	333.68	258.00	392.89	176.21	171.57
18	E6a_E7a	KnownJunction	0	115.58	129.26	297.05	239.43	208.28	192.53	146.04
19	ER7a	ExonRegion	0	160.80	155.18	377.55	261.83	368.60	216.20	182.25
20	E7a_E8a	KnownJunction	0	172.82	144.41	413.48	258.42	377.14	192.99	181.11
21	ER8a	ExonRegion	0	194.49	131.66	436.43	238.21	388.73	199.65	182.93
22	E8a_E9a	KnownJunction	0	173.21	117.51	407.14	209.33	401.76	195.50	178.30
23	ER9a	ExonRegion	0	183.09	120.30	446.22	233.96	396.37	210.50	182.77
24	E9a_E10a	KnownJunction	0	214.80	120.22	472.90	239.21	447.80	236.67	189.48
25	ER10a	ExonRegion	0	317.57	147.49	583.79	326.19	623.64	283.34	231.66
26	E10a_E11a	KnownJunction	0	311.82	168.06	582.06	395.88	615.00	283.25	236.60
27	ER11a	ExonRegion	0	344.60	158.34	561.08	335.37	565.91	276.30	236.00
28	E11a_E12a	KnownJunction	0	274.73	128.89	464.68	324.74	611.96	268.75	227.35
29	ER12a	ExonRegion	0	284.61	127.05	535.61	292.38	637.29	240.45	227.68
30	E12a_E14a	KnownJunction	0	263.97	116.30	474.01	225.83	591.61	215.09	189.17
31	E12b_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER12b	ExonRegion	0	1.87	0.00	1.65	0.00	0.69	0.00	0.48
33	E13a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER13a	ExonRegion	0	3.51	1.91	9.10	6.41	13.19	4.73	4.91
35	E14_Aa	NovelBoundary	1	106.20	1.02	174.05	0.00	0.00	1.66	3.78
36	ER14a	ExonRegion	0	213.86	114.04	444.30	248.32	496.44	236.68	195.87
37	E14a_E15a	KnownJunction	0	137.44	105.82	331.60	243.06	441.48	203.97	155.02
38	E15_Aa	NovelBoundary	1	59.87	1.63	130.81	1.03	1.08	0.00	1.58
39	ER15a	ExonRegion	0	150.31	127.52	352.19	265.08	369.53	224.06	167.20
40	E15a_E16a	KnownJunction	0	155.65	134.96	381.23	287.00	364.42	254.17	177.58
41	ER16a	ExonRegion	0	122.76	141.90	355.05	258.44	325.88	240.07	168.99
42	E16a_E17a	KnownJunction	0	104.28	133.88	299.58	232.77	325.09	213.86	144.26
43	ER17a	ExonRegion	0	116.31	112.09	347.70	238.22	346.95	224.00	166.86
44	E17a_E18a	KnownJunction	0	139.24	103.98	424.80	252.14	372.05	278.02	201.83
45	ER18a	ExonRegion	0	128.75	128.41	386.99	262.03	385.89	263.56	178.15
46	E18a_E19a	KnownJunction	0	98.24	132.09	310.23	271.99	306.00	238.28	188.50
47	ER19a	ExonRegion	0	172.48	142.57	360.95	291.31	454.28	258.07	187.25
48	E19a_E20a	KnownJunction	0	166.28	111.92	307.93	272.05	413.75	189.88	172.64
49	E19a_E21a	KnownJunction	0	1.02	12.40	2.66	13.41	0.00	18.01	0.59
50	ER20a	ExonRegion	0	249.34	141.33	399.07	322.56	601.57	279.39	205.89
51	E20a_E21a	KnownJunction	0	295.61	168.87	456.43	357.14	515.58	332.75	205.66
52	ER21a	ExonRegion	0	322.08	164.05	481.27	368.64	558.30	333.02	205.56
53	E21a_E22a	KnownJunction	0	308.73	122.56	454.00	313.82	561.04	329.82	167.06
54	E21a_E23a	NovelJunction	0	16.07	13.82	9.94	20.05	0.95	24.68	2.38
55	ER22a	ExonRegion	0	277.51	90.82	409.55	234.95	691.25	221.19	142.22
56	E22a_E23a	KnownJunction	0	215.03	74.69	307.40	229.16	713.35	199.90	104.19
57	ER23a	ExonRegion	0	316.98	101.02	443.04	290.83	827.26	289.46	140.97
58	E23_Da	NovelBoundary	1	88.82	25.14	99.30	25.25	51.75	7.08	15.01
59	E23a_E24a	KnownJunction	0	253.94	92.21	411.06	259.88	708.44	279.87	140.65
60	ER24a	ExonRegion	0	224.87	154.21	375.28	267.75	627.87	354.48	165.38
61	E24a_E25a	KnownJunction	0	250.73	162.59	412.40	301.79	693.38	449.22	157.42
62	ER25a	ExonRegion	0	250.11	173.91	428.54	340.46	612.17	353.50	207.42
63	E25a_E26a	KnownJunction	0	261.00	176.47	412.44	373.42	550.52	382.25	206.46
64	ER26a	ExonRegion	0	153.39	114.20	277.94	237.43	294.20	299.99	114.75
65	IG29	Intergenic	0	7.96	5.98	18.56	11.04	39.81	11.53	7.89
66	IG29_AR4	ActiveIntergenicRegion	0	6.24	6.09	26.62	8.02	44.80	14.86	10.17
67	IG29_SR3	SilentIntergenicRegion	0	7.27	11.53	20.33	14.02	51.27	5.10	14.37
68	IG29_AR3	ActiveIntergenicRegion	0	19.26	15.88	45.67	32.36	88.15	30.12	19.56
69	IG29_AR1	ActiveIntergenicRegion	0	7.69	3.02	18.27	6.09	54.93	10.21	5.59