Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ISY1	Gene	0	54.94	51.64	74.49	87.26	42.45	92.48	37.11
2	393295	Transcript	0	22.13	13.42	16.95	23.06	12.76	22.63	8.52
3	393292	Transcript	0	0.72	1.41	5.56	3.64	2.45	8.21	2.92
4	273541	Transcript	0	3.34	1.90	2.87	2.50	16.40	3.30	3.58
5	IG3	Intergenic	0	4.10	7.04	10.73	12.59	14.91	15.50	9.70
6	IG3_AR3	ActiveIntergenicRegion	0	12.52	25.78	34.32	45.50	69.29	70.72	32.33
7	ER1a	ExonRegion	0	22.13	13.42	16.95	23.06	12.76	22.63	8.52
8	E1_Ab	KnownBoundary	0	198.58	98.57	146.72	177.50	124.28	186.93	79.12
9	ER1b	ExonRegion	0	187.23	92.56	152.86	180.58	92.34	189.19	85.56
10	E1a_E2a	KnownJunction	0	76.64	30.63	69.15	71.06	23.79	67.94	39.20
11	E2a_E4a	KnownJunction	0	17.82	48.44	28.42	62.77	21.21	64.94	15.45
12	ER2a	ExonRegion	0	68.02	62.75	72.80	101.82	27.61	103.09	41.97
13	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER4a	ExonRegion	0	72.20	106.58	74.04	170.55	28.47	201.79	45.99
15	E4a_E5a	KnownJunction	0	149.81	135.14	127.15	249.29	43.43	301.82	80.33
16	E4a_E9a	NovelJunction	1	180.55	0.00	25.79	1.11	0.00	0.00	1.82
17	ER5a	ExonRegion	0	283.58	145.53	261.08	263.51	96.35	329.72	129.01
18	E5a_E6a	KnownJunction	0	228.40	116.62	229.25	192.92	200.24	237.26	96.48
19	ER6a	ExonRegion	0	212.23	114.85	232.28	212.53	247.95	256.97	94.68
20	E6a_E7a	KnownJunction	0	174.79	86.46	192.81	192.48	232.05	222.57	65.61
21	ER7a	ExonRegion	0	238.25	171.99	299.33	275.36	154.75	358.46	111.67
22	E7a_E8a	KnownJunction	0	268.26	199.08	370.09	348.23	129.42	425.96	123.41
23	ER8a	ExonRegion	0	261.93	192.93	356.22	293.99	166.39	325.37	132.49
24	E8a_E9a	KnownJunction	0	1.54	1.58	2.50	3.44	0.90	7.64	6.95
25	E8a_E10a	KnownJunction	0	206.30	168.56	276.63	274.27	181.36	243.88	125.20
26	E8a_E12a	NovelJunction	0	1.62	1.63	6.87	4.14	1.06	9.38	1.76
27	ER9a	ExonRegion	0	11.04	2.01	8.98	3.53	63.81	5.57	4.42
28	E9_Da	NovelBoundary	0	2702.84	1648.66	1962.10	1491.53	1427.36	1507.14	1426.58
29	E9a_E10a	KnownJunction	0	0.77	4.02	0.00	3.03	0.88	0.00	2.95
30	ER10a	ExonRegion	0	172.29	178.53	253.53	284.36	151.19	298.02	133.64
31	E10a_E11a	KnownJunction	0	145.04	144.26	209.95	265.52	115.84	249.69	104.12
32	E10a_E12a	NovelJunction	0	1.60	11.82	2.69	10.13	0.00	20.56	0.57
33	E10b_E11a	KnownJunction	0	0.67	1.60	5.03	3.55	1.87	9.06	3.14
34	ER10b	ExonRegion	0	0.77	1.21	6.10	3.74	3.04	7.36	2.70
35	ER11a	ExonRegion	0	90.96	130.52	143.23	210.04	80.55	227.52	79.71
36	E11a_E12a	KnownJunction	0	84.87	131.83	128.18	197.41	77.60	204.13	90.47
37	ER12a	ExonRegion	0	72.72	120.97	116.32	187.79	80.40	190.37	84.30
38	E12a_E13a	KnownJunction	0	63.46	120.17	97.27	172.30	92.21	188.03	91.74
39	ER13a	ExonRegion	0	71.82	76.83	119.99	142.49	70.27	133.86	59.29
40	E13_Da	KnownBoundary	0	53.62	63.26	60.38	104.95	22.52	113.55	40.20
41	ER13b	ExonRegion	0	5.57	10.31	7.82	16.03	3.05	16.92	6.67
42	IG2	Intergenic	0	16.74	9.97	6.66	5.56	1.05	3.95	8.55
43	IG2_AR2	ActiveIntergenicRegion	0	47.22	24.55	15.92	8.40	2.59	8.10	18.33
44	IG2_SR2	SilentIntergenicRegion	0	43.32	23.41	15.47	16.28	2.68	9.24	21.88
45	IG2_AR1	ActiveIntergenicRegion	0	12.73	13.26	5.87	8.96	0.68	5.82	6.69