Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZXDC	Gene	0	65.18	72.12	81.65	87.16	45.45	65.46	47.89
2	336332	Transcript	0	55.89	49.33	66.60	64.98	45.78	51.15	24.24
3	389709	Transcript	0	22.97	28.75	27.22	27.32	19.26	28.72	39.87
4	ER1a	ExonRegion	0	32.46	60.57	32.74	62.82	15.08	49.05	22.93
5	E1a_E2a	KnownJunction	1	244.42	194.91	220.02	223.15	66.05	165.17	71.90
6	ER2a	ExonRegion	0	263.96	204.22	272.74	248.35	100.16	180.31	100.90
7	E2a_E3a	KnownJunction	0	201.96	159.36	245.11	181.67	90.14	158.98	93.48
8	ER3a	ExonRegion	0	166.62	196.04	224.97	198.55	89.16	132.17	95.56
9	E3a_E4a	KnownJunction	0	156.79	195.49	202.41	216.57	92.56	108.38	92.71
10	ER4a	ExonRegion	0	117.28	194.13	179.34	221.50	79.88	149.33	112.02
11	E4a_E5a	KnownJunction	0	92.15	201.76	189.46	196.00	85.06	150.24	91.18
12	ER5a	ExonRegion	0	91.61	149.83	167.01	201.71	81.82	126.66	112.72
13	E5a_E6a	KnownJunction	0	93.58	133.72	188.67	186.31	80.29	113.47	102.96
14	ER6a	ExonRegion	0	128.32	143.37	180.90	182.57	94.44	126.30	134.84
15	E6_Da	KnownBoundary	0	55.36	72.51	70.80	82.87	58.67	54.78	39.10
16	E6a_E6b	KnownJunction	0	22.73	31.53	34.00	35.38	19.99	44.57	49.39
17	ER6b	ExonRegion	0	58.26	51.51	68.41	66.66	42.21	43.35	22.67
18	E6_Ab	KnownBoundary	0	45.81	47.58	50.97	66.97	47.21	55.37	23.30
19	ER6c	ExonRegion	0	67.79	83.72	89.87	104.25	60.17	94.21	67.52
20	E6_Db	KnownBoundary	0	59.70	53.17	69.72	83.68	35.92	67.56	28.91
21	E6b_E7a	KnownJunction	1	10.70	12.61	25.51	17.26	9.54	16.91	36.22
22	E6b_E8a	NovelJunction	0	9.06	7.17	10.10	8.67	0.00	8.90	11.92
23	ER6d	ExonRegion	0	53.53	47.16	64.80	63.30	49.36	58.95	25.80
24	E6_Dc	NovelBoundary	0	27.05	8.72	25.71	22.00	38.13	2.68	10.86
25	I6	Intron	1	18.53	9.31	14.31	8.93	14.58	4.80	14.37
26	I6_AR1	ActiveIntronRegion	0	39.08	5.81	21.76	15.96	42.93	5.48	8.84
27	I6_SR1	SilentIntronRegion	0	9.12	3.91	12.63	9.00	12.92	2.45	5.57
28	I6_AR3	ActiveIntronRegion	1	24.09	26.63	33.60	31.96	39.61	11.41	25.77
29	I6_SR2	SilentIntronRegion	0	1.70	0.00	0.55	0.00	9.31	0.58	0.00
30	I6_AR4	ActiveIntronRegion	0	29.98	13.50	30.35	13.62	33.74	8.91	17.87
31	I6_AR5	ActiveIntronRegion	0	31.03	10.46	28.36	7.89	23.72	8.19	12.53
32	I6_AR6	ActiveIntronRegion	0	20.88	11.77	19.44	13.39	27.00	9.06	13.58
33	I6_SR5	SilentIntronRegion	1	13.56	5.52	11.83	6.94	9.83	2.12	14.59
34	I6_AR7	ActiveIntronRegion	1	11.52	7.63	7.62	6.13	7.41	3.00	11.52
35	I6_SR6	SilentIntronRegion	1	18.86	9.99	13.80	6.86	7.05	2.73	15.92
36	I6_AR8	ActiveIntronRegion	1	21.61	9.53	14.63	8.23	11.56	3.23	17.54
37	I6_SR7	SilentIntronRegion	1	19.02	11.69	13.24	10.96	12.85	7.49	25.35
38	I6_AR9	ActiveIntronRegion	1	25.18	11.21	18.60	12.86	14.02	4.84	21.36
39	I6_SR8	SilentIntronRegion	1	20.90	7.36	8.37	3.60	8.06	3.36	16.65
40	I6_AR10	ActiveIntronRegion	1	12.47	4.53	7.92	5.00	4.57	3.56	12.33
41	E7_Aa	NovelBoundary	0	15.61	6.96	8.42	2.98	4.31	4.58	13.87
42	ER7a	ExonRegion	0	16.67	26.67	19.89	16.11	12.84	15.08	35.11
43	E7a_E8a	KnownJunction	0	17.36	26.46	22.83	15.44	20.38	17.04	32.96
44	I7	Intron	1	7.62	4.22	3.39	2.22	2.84	1.55	9.59
45	I7_AR1	ActiveIntronRegion	1	7.63	4.23	3.39	2.22	2.84	1.55	9.60
46	E8_Aa	NovelBoundary	1	7.84	1.08	3.05	0.00	4.31	1.47	14.15
47	ER8a	ExonRegion	0	23.87	36.29	24.21	29.82	21.66	25.11	36.86
48	E8a_E9a	KnownJunction	0	35.75	28.92	23.44	35.60	25.15	33.77	42.65
49	ER9a	ExonRegion	0	33.74	38.79	40.68	41.65	25.26	48.60	45.88