Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	LRIG1	Gene	0	278.11	88.76	136.27	42.71	493.56	52.82	14.25
2	383703	Transcript	0	2.95	1.31	0.29	0.00	3.67	0.50	0.17
3	273261	Transcript	1	241.74	90.11	161.81	35.76	375.09	57.91	7.21
4	383702	Transcript	0	22.23	4.60	10.62	1.52	2.21	0.00	3.25
5	ER1a	ExonRegion	0	13.76	20.74	6.42	11.10	22.83	11.76	1.56
6	E1a_E2a	KnownJunction	1	67.91	62.47	37.98	35.33	180.96	16.13	7.98
7	ER2a	ExonRegion	0	99.90	69.35	60.17	32.49	220.01	28.37	9.29
8	E2a_E3a	KnownJunction	0	114.91	72.17	79.71	31.26	230.11	34.41	11.25
9	E2a_E4a	NovelJunction	0	5.61	8.30	3.16	4.31	10.90	3.86	0.54
10	ER3a	ExonRegion	0	146.75	86.98	87.04	35.16	279.42	37.68	11.02
11	E3a_E4a	KnownJunction	0	175.83	75.45	84.64	35.71	264.23	41.97	10.96
12	ER4a	ExonRegion	0	283.94	95.57	135.71	45.71	438.63	56.72	13.71
13	E4a_E5a	KnownJunction	0	291.19	105.09	163.23	43.64	419.75	53.84	14.59
14	ER5a	ExonRegion	0	357.70	129.26	189.18	51.27	581.63	62.19	17.10
15	E5a_E6a	KnownJunction	0	347.07	122.69	192.94	70.63	653.46	62.93	15.09
16	ER6a	ExonRegion	0	274.31	115.65	180.71	64.86	526.34	48.16	18.81
17	E6a_E7a	KnownJunction	0	241.40	118.93	152.00	45.13	489.94	49.77	10.79
18	ER7a	ExonRegion	0	201.65	117.38	134.23	48.77	464.29	44.36	12.84
19	E7a_E8a	KnownJunction	0	182.57	101.96	117.99	36.25	456.28	37.98	11.02
20	ER8a	ExonRegion	0	194.94	99.64	119.89	42.57	426.01	42.71	11.13
21	E8a_E9a	KnownJunction	1	265.95	89.53	157.13	53.53	502.78	49.87	5.04
22	ER9a	ExonRegion	1	288.97	84.43	175.73	46.15	442.64	46.15	6.80
23	E9a_E10a	KnownJunction	0	1.87	0.00	0.83	0.00	0.00	0.00	0.00
24	E9a_E11a	KnownJunction	1	241.74	90.11	161.81	35.76	375.09	57.91	7.21
25	E9a_E12a	KnownJunction	0	22.23	4.60	10.62	1.52	2.21	0.00	3.25
26	ER10a	ExonRegion	0	4.02	2.46	0.34	0.00	5.07	0.49	0.67
27	E10a_E11a	KnownJunction	0	2.77	0.00	0.00	0.00	0.00	1.50	0.00
28	E11_Aa	NovelBoundary	0	18.98	10.82	14.14	4.80	4.73	8.47	8.84
29	ER11a	ExonRegion	1	302.03	100.56	173.64	52.65	549.84	72.88	8.24
30	E11a_E12a	KnownJunction	0	373.05	103.14	184.30	60.60	734.23	82.19	11.48
31	I11	Intron	0	11.83	7.74	7.55	8.65	5.24	4.02	5.54
32	I11_SR1	SilentIntronRegion	0	11.74	5.55	6.42	10.33	4.00	8.66	5.69
33	I11_AR2	ActiveIntronRegion	0	11.51	6.17	6.05	10.37	8.28	7.00	5.61
34	I11_SR2	SilentIntronRegion	1	12.81	7.33	9.71	9.80	6.07	1.63	6.03
35	E12_Aa	NovelBoundary	1	12.88	13.35	14.36	16.07	8.39	2.65	3.58
36	ER12a	ExonRegion	0	428.74	112.27	247.02	59.85	743.12	68.06	16.03
37	E12a_E13a	KnownJunction	1	348.92	96.71	216.55	49.33	702.07	56.17	11.45
38	E12a_E14a	NovelJunction	0	8.53	11.64	2.21	3.03	8.83	9.03	0.00
39	ER13a	ExonRegion	0	307.47	100.95	168.79	54.89	599.81	58.64	16.27
40	E13a_E14a	KnownJunction	0	333.18	128.99	177.43	53.21	902.96	73.86	16.74
41	I13_AR1	ActiveIntronRegion	0	26.40	18.19	15.45	10.05	9.96	4.55	8.59
42	E14_Aa	NovelBoundary	0	20.40	29.32	12.86	15.66	14.59	9.25	9.06
43	ER14a	ExonRegion	0	465.04	167.25	223.06	69.08	961.95	86.53	29.86
44	E14a_E15a	KnownJunction	0	736.91	176.57	310.86	82.28	2160.03	101.28	39.87
45	ER15a	ExonRegion	0	431.86	108.44	180.35	50.04	879.72	59.50	22.11
46	E15_Da	KnownBoundary	0	362.92	117.41	160.36	37.36	610.67	66.25	13.14
47	E15a_E16a	KnownJunction	0	3.12	2.78	0.00	0.00	9.61	0.00	0.00
48	ER15b	ExonRegion	0	350.37	118.52	157.49	39.70	542.94	63.86	15.74
49	E15b_E16a	KnownJunction	1	241.00	107.50	118.28	24.68	426.71	33.85	3.70
50	I15	Intron	0	18.60	9.36	14.51	10.44	21.33	9.04	5.75
51	I15_AR1	ActiveIntronRegion	0	18.68	9.40	14.57	10.48	21.41	9.08	5.78
52	E16_Aa	NovelBoundary	0	28.42	5.88	9.53	16.01	26.16	15.28	5.95
53	ER16a	ExonRegion	0	235.36	103.67	113.36	41.46	485.39	54.50	16.21
54	E16a_E17a	KnownJunction	0	260.43	125.45	127.09	32.21	603.06	78.79	20.54
55	E17_Aa	NovelBoundary	0	11.70	25.93	6.16	7.69	9.66	10.34	4.33
56	ER17a	ExonRegion	0	215.78	109.07	123.85	40.80	602.54	64.84	14.85
57	E17a_E18a	KnownJunction	0	216.99	106.24	135.25	36.41	629.25	74.32	15.11
58	ER18a	ExonRegion	0	209.45	89.95	118.06	45.97	487.02	58.58	13.62
59	E18a_E19a	KnownJunction	0	215.15	77.71	109.19	38.12	346.85	42.00	6.95
60	E19_Aa	NovelBoundary	0	5.19	17.81	6.62	5.80	3.09	7.10	11.92
61	ER19a	ExonRegion	0	220.92	96.56	128.23	45.91	495.62	55.38	12.72
62	E19_Da	NovelBoundary	0	8.14	8.28	4.20	11.81	1.06	7.13	7.44
63	E19a_E20a	KnownJunction	0	307.70	110.68	151.22	62.53	475.03	69.89	16.70
64	E20_Aa	NovelBoundary	0	6.74	11.98	11.11	6.77	1.15	5.68	9.11
65	ER20a	ExonRegion	0	391.13	85.24	173.80	47.47	591.36	63.64	16.90