Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TUSC4	Gene	0	27.62	50.79	24.38	36.50	83.68	31.49	51.56
2	232501	Transcript	0	35.65	59.81	31.10	42.67	108.49	39.38	67.21
3	ER1a	ExonRegion	0	9.05	22.81	7.06	20.43	24.92	14.98	15.23
4	E1_Da	NovelBoundary	0	1.03	16.87	3.12	10.92	4.31	5.44	2.49
5	E1a_E2a	KnownJunction	0	34.82	40.98	29.43	38.58	47.42	52.02	59.02
6	E2_Aa	NovelBoundary	0	12.05	13.27	5.20	6.34	13.07	6.46	4.72
7	ER2a	ExonRegion	0	44.14	66.30	34.64	51.22	125.02	49.64	81.83
8	E2_Da	NovelBoundary	0	4.37	15.16	2.14	8.37	9.06	16.19	4.47
9	E2a_E3a	KnownJunction	0	38.09	54.91	31.43	37.11	148.94	36.77	80.24
10	E3_Aa	NovelBoundary	0	9.23	10.88	2.11	13.76	8.25	10.02	4.77
11	ER3a	ExonRegion	0	36.00	63.95	34.95	47.53	94.53	45.04	73.51
12	E3_Da	NovelBoundary	0	11.32	25.35	7.83	15.69	8.88	20.10	4.84
13	E3a_E4a	KnownJunction	0	24.57	41.67	21.31	31.62	124.65	30.52	65.28
14	I3	Intron	0	6.83	18.37	6.10	14.95	4.08	15.27	2.71
15	I3_AR1	ActiveIntronRegion	0	6.90	18.55	6.15	15.09	4.13	15.41	2.75
16	E4_Aa	NovelBoundary	0	4.17	19.60	5.58	21.08	11.04	13.83	8.66
17	ER4a	ExonRegion	0	41.01	64.22	36.35	48.72	128.91	33.52	81.64
18	E4_Da	NovelBoundary	0	4.82	8.38	4.87	5.58	2.81	12.35	3.60
19	E4a_E5a	KnownJunction	0	37.44	54.04	32.53	46.79	103.12	31.14	50.13
20	I4	Intron	0	3.83	9.45	2.29	10.44	3.10	6.61	1.61
21	I4_AR1	ActiveIntronRegion	0	3.86	9.51	2.30	10.52	3.12	6.66	1.62
22	E5_Aa	NovelBoundary	0	6.99	17.47	2.21	23.84	5.00	15.89	4.59
23	ER5a	ExonRegion	0	47.64	79.36	37.87	54.17	142.39	52.61	78.53
24	E5_Da	NovelBoundary	0	4.61	14.55	1.41	10.94	4.26	4.61	4.43
25	E5a_E6a	KnownJunction	0	50.02	95.16	39.09	76.99	147.10	57.14	80.66
26	E6_Aa	NovelBoundary	1	11.28	14.45	1.60	14.58	7.79	9.78	3.51
27	ER6a	ExonRegion	0	49.02	86.01	36.42	54.64	186.22	57.71	85.07
28	E6_Da	NovelBoundary	0	7.58	9.83	1.47	16.20	3.18	14.42	5.06
29	E6a_E7a	KnownJunction	0	41.49	73.67	46.88	37.14	156.14	49.47	83.37
30	E7_Aa	NovelBoundary	0	7.96	3.10	5.72	12.54	12.13	12.60	3.15
31	ER7a	ExonRegion	0	56.97	79.26	46.54	44.62	128.81	61.27	106.39
32	E7a_E8a	KnownJunction	0	53.57	60.27	34.13	45.40	117.50	62.58	79.65
33	ER8a	ExonRegion	0	36.34	73.98	29.29	40.37	105.22	39.17	73.57
34	E8_Da	NovelBoundary	0	2.12	11.24	1.57	6.26	1.15	11.01	1.40
35	E8a_E9a	KnownJunction	0	27.25	65.89	17.80	38.01	79.09	37.20	56.55
36	E8a_E10a	NovelJunction	0	1.95	7.72	2.13	13.33	3.23	8.01	0.69
37	ER9a	ExonRegion	0	43.13	59.04	41.70	37.61	147.13	28.53	73.77
38	E9_Da	NovelBoundary	0	6.58	22.38	3.94	8.21	2.26	6.70	1.98
39	E9a_E10a	KnownJunction	0	18.71	37.15	29.44	30.07	74.00	15.92	59.46
40	I9	Intron	0	4.20	14.94	2.21	6.40	2.41	10.91	1.15
41	I9_AR1	ActiveIntronRegion	0	4.24	15.08	2.23	6.46	2.43	11.01	1.17
42	E10_Aa	NovelBoundary	0	7.09	17.08	2.08	10.86	4.15	12.33	0.63
43	ER10a	ExonRegion	0	21.98	50.27	24.71	43.66	60.62	29.30	47.62
44	E10a_E11a	KnownJunction	0	27.24	53.33	28.44	50.20	97.44	26.48	57.45
45	ER11a	ExonRegion	0	10.22	33.85	13.07	21.24	39.16	16.06	22.38