Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	UBE2F	Gene	0	79.34	90.71	112.16	106.04	171.87	104.94	200.07
2	409633	Transcript	0	0.22	2.05	1.42	1.87	3.58	0.23	2.35
3	272930	Transcript	0	22.05	22.73	34.70	38.52	47.97	22.88	48.54
4	409953	Transcript	0	0	0	0	0	0	0	0
5	409332	Transcript	0	1.70	0.00	1.90	3.17	3.53	3.62	1.78
6	ER1a	ExonRegion	0	0.44	4.11	2.19	3.74	6.21	0.47	4.69
7	ER1b	ExonRegion	0	9.38	19.88	15.48	17.70	56.79	8.01	28.96
8	E1_Ac	KnownBoundary	0	8.48	22.44	11.83	16.20	17.75	3.06	22.87
9	E1_Ad	KnownBoundary	0	7.06	8.25	15.36	11.35	7.88	10.69	25.84
10	ER1c	ExonRegion	0	15.37	25.51	26.42	24.94	64.79	19.62	49.25
11	ER1d	ExonRegion	0	15.69	26.39	23.84	24.99	34.21	27.29	48.52
12	E1a_E2a	KnownJunction	0	12.92	29.84	19.59	23.19	11.50	30.04	50.03
13	ER2a	ExonRegion	0	38.11	82.29	59.95	80.04	69.74	90.75	130.38
14	E2a_E9a	NovelJunction	1	0.00	0.00	0.55	0.00	0.00	11.12	0.00
15	E3a_E4a	KnownJunction	0	74.14	152.45	132.87	139.57	369.40	169.56	310.29
16	E3a_E5a	KnownJunction	0	1.70	0.00	1.90	3.17	3.53	3.62	1.78
17	ER3a	ExonRegion	0	74.87	141.09	131.73	130.18	306.85	138.95	294.48
18	ER4a	ExonRegion	0	90.65	134.28	134.09	111.21	265.28	123.16	292.11
19	E4a_E5a	KnownJunction	1	85.80	222.47	117.08	112.05	183.29	100.85	276.70
20	E4a_E6a	NovelJunction	1	13.05	48.81	35.61	50.52	17.96	56.82	15.74
21	ER5a	ExonRegion	0	114.67	119.38	156.21	107.09	240.26	85.71	321.37
22	E5a_E6a	KnownJunction	0	117.35	125.71	165.85	99.86	239.73	87.72	363.53
23	ER6a	ExonRegion	0	131.67	139.21	194.62	145.74	292.13	133.17	409.82
24	E6a_E7a	KnownJunction	0	150.49	151.19	199.07	194.22	384.77	175.75	419.72
25	E6a_E8a	NovelJunction	0	0.75	6.41	2.67	2.65	0.00	10.34	1.52
26	E6a_E9a	NovelJunction	0	4.27	9.56	9.73	5.74	3.16	11.71	4.44
27	ER7a	ExonRegion	0	156.62	170.60	205.94	194.16	389.85	185.59	435.86
28	E7a_E8a	KnownJunction	0	112.31	201.55	153.55	146.45	387.40	177.55	293.11
29	ER8a	ExonRegion	0	153.76	159.18	235.26	167.66	401.47	185.50	447.95
30	E8a_E9a	KnownJunction	0	111.94	123.82	192.68	138.68	366.36	135.34	386.70
31	E8a_E10a	KnownJunction	0	0.00	0.00	0.65	0.00	0.95	0.00	0.00
32	ER9a	ExonRegion	0	136.40	170.06	213.68	189.38	316.16	185.42	431.19
33	E9a_E10a	KnownJunction	0	220.41	557.48	214.22	304.91	289.38	295.33	394.76
34	ER10a	ExonRegion	0	139.65	158.73	177.39	187.02	292.95	195.63	337.17
35	E10_Da	KnownBoundary	0	146.17	117.80	160.89	176.17	280.18	186.34	227.05
36	ER10b	ExonRegion	0	108.24	97.57	145.91	136.52	188.67	146.55	191.52
37	E10_Db	KnownBoundary	0	78.94	90.19	136.65	123.91	109.43	119.63	161.01
38	ER10c	ExonRegion	0	60.68	62.90	98.92	84.06	112.45	86.41	116.78
39	E10_Dc	KnownBoundary	0	30.64	38.41	63.92	54.89	84.35	35.40	65.35
40	ER10d	ExonRegion	0	22.05	22.73	34.70	38.52	47.97	22.88	48.54
41	IG17	Intergenic	0	4.31	7.71	7.43	10.58	9.81	8.12	12.12
42	IG17_AR1	ActiveIntergenicRegion	0	7.16	17.06	12.83	21.74	18.66	13.34	26.61
43	IG17_SR1	SilentIntergenicRegion	0	8.81	16.11	17.84	25.46	22.61	15.13	23.75
44	IG17_AR2	ActiveIntergenicRegion	0	11.70	20.85	17.81	30.15	29.36	27.74	30.65
45	IG17_SR2	SilentIntergenicRegion	0	3.81	5.98	3.83	5.39	6.91	6.75	9.22