Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ANKMY1	Gene	0	7.32	4.65	9.31	5.36	6.54	2.83	8.62
2	403283	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	405002	Transcript	0	8.98	5.65	6.12	2.60	8.29	1.50	8.12
4	405523	Transcript	0	0.42	0.00	0.20	0.00	0.00	0.00	0.38
5	401804	Transcript	0	0	0	0	0	0	0	0
6	272972	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	361678	Transcript	0	0.00	1.50	2.47	4.33	0.00	0.00	1.16
8	391987	Transcript	0	0	0	0	0	0	0	0
9	391988	Transcript	0	0	0	0	0	0	0	0
10	373320	Transcript	1	7.41	3.23	11.75	7.40	1.08	3.54	4.06
11	373318	Transcript	0	0.00	0.00	0.89	0.00	0.00	0.00	0.00
12	406958	Transcript	0	0	0	0	0	0	0	0
13	407275	Transcript	0	0.57	0.16	2.66	0.15	2.08	0.06	1.88
14	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER1b	ExonRegion	0	0.80	1.24	0.44	1.28	0.31	0.26	0.66
16	E1_Da	NovelBoundary	0	0.65	12.30	0.76	5.04	0.00	15.62	2.31
17	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	E1a_E4a	KnownJunction	0	10.25	6.49	4.41	1.00	3.25	0.00	6.46
19	ER2a	ExonRegion	0	0.00	0.00	0.07	0.00	0.00	0.00	0.00
20	E2_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER2b	ExonRegion	0	0.00	0.00	0.68	0.45	0.00	0.00	0.00
22	E2_Ad	KnownBoundary	0	0.00	0.00	2.23	2.79	0.00	0.00	0.00
23	ER2c	ExonRegion	0	0.00	0.00	0.95	1.90	0.00	0.00	0.00
24	ER2d	ExonRegion	0	0.00	0.00	2.05	1.66	0.00	0.00	0.00
25	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER3a	ExonRegion	0	0.23	2.65	2.45	1.74	0.38	0.00	0.25
28	E3a_E4a	KnownJunction	0	0.00	4.23	4.31	0.00	1.18	0.00	0.67
29	ER4a	ExonRegion	0	12.73	9.47	11.99	10.53	6.18	1.41	8.61
30	E4a_E5a	KnownJunction	0	17.82	4.99	22.59	10.86	10.03	1.10	18.62
31	ER5a	ExonRegion	0	20.42	11.99	24.80	16.17	12.30	4.87	17.90
32	E5a_E6a	KnownJunction	1	5.02	2.42	14.82	14.30	1.01	2.76	4.00
33	E5a_E8b	KnownJunction	0	8.40	1.55	5.07	7.99	5.33	1.29	12.48
34	ER6a	ExonRegion	1	9.76	5.39	23.97	9.37	3.18	4.16	8.43
35	E6a_E7a	KnownJunction	1	2.52	1.58	10.32	0.00	0.95	1.39	4.01
36	E6a_E8b	KnownJunction	1	7.41	3.23	11.75	7.40	1.08	3.54	4.06
37	ER7a	ExonRegion	0	3.73	2.84	8.66	2.60	3.53	1.17	7.31
38	E7a_E8b	KnownJunction	0	1.30	1.44	10.12	0.00	0.00	0.00	5.50
39	ER8a	ExonRegion	0	0.57	0.16	2.66	0.15	2.08	0.06	1.88
40	E8_Ab	KnownBoundary	0	5.02	0.00	4.33	0.00	2.14	0.00	4.27
41	ER8b	ExonRegion	0	25.22	12.85	33.43	17.37	13.60	7.68	35.24
42	E8a_E9a	KnownJunction	0	27.37	10.40	31.87	20.18	12.82	9.86	33.41
43	ER9a	ExonRegion	0	24.82	10.11	30.11	11.27	12.86	9.78	30.53
44	E9_Da	KnownBoundary	0	15.15	9.59	23.34	12.06	15.63	9.76	26.36
45	E9a_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER9b	ExonRegion	0	13.15	8.87	15.05	14.38	11.27	8.87	19.23
47	E9_Ab	KnownBoundary	0	9.41	5.15	15.86	15.93	10.07	10.16	18.16
48	ER9c	ExonRegion	0	11.69	10.73	13.53	10.26	11.70	3.22	14.88
49	E9_Db	KnownBoundary	1	3.77	2.89	1.64	3.93	4.89	0.00	8.00
50	E9b_E10a	KnownJunction	0	2.59	1.52	6.19	5.47	1.13	4.05	6.75
51	ER9d	ExonRegion	0	7.71	4.82	7.83	4.19	13.34	3.00	9.78
52	ER10a	ExonRegion	0	6.25	2.90	7.11	5.25	1.72	2.77	5.38
53	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	E10a_E12a	KnownJunction	0	6.51	1.29	5.82	7.83	1.18	6.19	7.82
55	ER11a	ExonRegion	0	1.26	0.00	0.53	0.00	0.00	0.00	1.15
56	ER12a	ExonRegion	0	6.46	5.61	6.80	7.05	1.28	2.90	10.22
57	E12a_E13a	KnownJunction	0	2.79	2.81	3.89	3.20	0.00	0.00	0.00
58	E12a_E15a	KnownJunction	0	0.00	1.50	2.47	4.33	0.00	0.00	1.16
59	ER13a	ExonRegion	0	2.84	1.77	3.38	1.07	0.28	1.32	1.77
60	E13a_E14a	KnownJunction	0	1.99	0.00	0.00	1.30	0.00	0.00	0.00
61	E13a_E15a	KnownJunction	0	1.69	1.58	1.38	0.00	0.00	0.00	0.00
62	E13a_E16a	KnownJunction	0	0.00	0.00	0.89	0.00	0.00	0.00	0.00
63	ER14a	ExonRegion	0	0.98	1.71	2.62	2.38	0.37	0.40	2.74
64	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.66	2.39
65	ER15a	ExonRegion	0	6.09	4.93	6.21	6.02	0.63	1.21	8.04
66	E15a_E16a	KnownJunction	0	3.81	4.18	4.80	1.44	0.00	2.81	9.72
67	ER16a	ExonRegion	0	5.14	8.10	8.82	4.19	0.45	3.66	13.07
68	E16a_E17a	KnownJunction	0	7.21	8.46	10.40	4.74	2.07	4.45	7.48
69	ER17a	ExonRegion	0	5.96	3.48	4.83	4.71	0.68	3.35	7.06
70	E17a_E18a	KnownJunction	0	2.50	1.47	0.86	0.00	0.00	1.39	2.79
71	ER18a	ExonRegion	0	2.13	2.29	1.11	1.99	0.50	0.33	2.43
72	E18a_E19a	KnownJunction	0	1.44	2.31	2.70	2.33	0.00	0.00	1.53
73	ER19a	ExonRegion	0	5.43	3.77	5.83	1.54	0.51	2.30	3.19
74	E19a_E20a	KnownJunction	0	2.90	2.89	4.44	1.44	0.00	0.00	2.18
75	ER20a	ExonRegion	0	5.38	2.17	8.37	4.17	1.38	0.00	4.18
76	E20_Da	KnownBoundary	0	7.38	1.13	12.79	5.58	1.13	0.00	6.11
77	ER20b	ExonRegion	0	6.47	1.46	7.32	3.41	0.10	3.98	3.20
78	ER20c	ExonRegion	0	6.92	0.00	4.74	1.25	0.00	3.68	0.67
79	ER20d	ExonRegion	0	4.30	0.00	2.44	0.25	0.00	3.68	0.67
80	IG45_SR2	SilentIntergenicRegion	0	0.99	1.24	10.37	3.62	0.15	3.44	10.57