Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 STK25 Gene 0 120.01 91.37 122.17 76.16 299.02 51.83 197.98 2 403346 Transcript 0 0.56 1.53 0.36 0.00 1.26 0.61 1.14 3 316586 Transcript 0 0 0 0 0 0 0 0 4 405585 Transcript 0 0 0 0 0 0 0 0 5 405883 Transcript 0 0 0 0 0 0 0 0 6 401869 Transcript 0 4.69 6.88 2.70 3.18 3.81 2.45 2.81 7 ER1a ExonRegion 0 1.11 0.63 0.03 0.00 0.91 0.00 0.25 8 E1_Ab KnownBoundary 0 0.73 0.00 0.00 0.00 2.05 0.00 0.80 9 E1_Ac KnownBoundary 0 0.85 0.00 0.00 0.00 2.21 0.00 0.73 10 E1_Ad KnownBoundary 0 18.56 7.78 9.30 3.31 42.74 0.00 18.20 11 ER1b ExonRegion 0 5.38 2.43 0.68 0.00 4.86 0.00 2.02 12 ER1c ExonRegion 0 9.44 4.51 2.06 0.85 19.87 0.00 8.53 13 ER1d ExonRegion 0 17.07 12.55 9.23 2.49 53.29 1.47 17.59 14 E1_Da KnownBoundary 0 9.35 10.98 12.60 2.49 41.45 2.92 11.41 15 E1a_E2b KnownJunction 0 8.51 3.81 3.18 0.00 5.60 0.00 5.42 16 ER1e ExonRegion 0 4.28 8.21 10.48 2.63 19.96 2.41 8.62 17 E1b_E2b KnownJunction 0 3.24 8.07 8.92 4.93 5.35 1.55 8.10 18 ER2a ExonRegion 0 4.69 6.88 2.70 3.18 3.81 2.45 2.81 19 E2_Ab KnownBoundary 0 32.90 17.02 14.13 5.23 14.02 9.78 12.97 20 ER2b ExonRegion 0 79.42 54.39 66.77 28.80 106.74 23.54 73.04 21 E2a_E3a KnownJunction 0 159.22 89.24 156.59 45.49 197.49 41.22 176.61 22 E2a_E4a KnownJunction 0 0.70 1.60 2.64 1.68 0.95 0.00 3.93 23 ER3a ExonRegion 0 179.41 156.31 199.59 97.74 338.32 80.33 281.04 24 E3a_E4a KnownJunction 0 128.85 118.62 164.20 86.39 335.23 64.24 242.44 25 ER4a ExonRegion 0 161.49 143.46 186.22 105.07 425.12 75.41 314.55 26 E4a_E5a KnownJunction 0 183.74 144.68 210.18 108.61 539.34 92.35 359.63 27 ER5a ExonRegion 0 199.06 136.38 223.70 126.93 600.95 85.62 403.23 28 E5_Da NovelBoundary 0 18.46 21.73 24.98 13.38 36.88 14.82 9.69 29 E5a_E6a KnownJunction 0 185.78 116.30 213.37 112.64 610.39 72.39 356.19 30 I5 Intron 0 24.25 20.56 25.12 15.35 39.41 11.43 13.68 31 I5_AR1 ActiveIntronRegion 0 24.31 20.61 25.19 15.39 39.50 11.46 13.72 32 E6_Aa NovelBoundary 0 40.54 30.16 36.59 17.31 105.03 21.33 28.23 33 ER6a ExonRegion 0 221.98 165.52 259.22 145.81 534.24 100.76 429.38 34 E6a_E7a KnownJunction 0 250.28 151.01 270.02 145.40 591.65 112.16 436.05 35 ER7a ExonRegion 0 187.99 151.63 219.80 122.16 461.35 94.94 335.66 36 E7a_E8a KnownJunction 0 182.54 107.16 195.31 98.83 329.59 100.18 309.20 37 ER8a ExonRegion 0 127.01 111.31 121.98 88.64 319.17 62.11 219.43 38 E8a_E9a KnownJunction 0 90.99 98.60 100.00 79.11 241.64 49.61 176.09 39 E8a_E10a NovelJunction 0 3.69 9.33 7.42 16.28 4.01 14.71 9.17 40 ER9a ExonRegion 0 91.58 85.72 83.13 69.04 254.46 44.10 162.07 41 E9a_E10a KnownJunction 0 109.84 77.24 78.00 67.67 224.56 30.85 150.49 42 ER10a ExonRegion 0 106.05 95.18 82.57 79.56 304.30 41.94 145.73 43 E10a_E11a KnownJunction 0 130.48 103.06 114.11 84.96 302.68 54.64 151.48 44 ER11a ExonRegion 0 123.56 99.66 116.08 91.37 428.29 58.20 175.43 45 E11a_E12a KnownJunction 0 197.31 132.43 184.62 119.04 832.71 73.70 314.40 46 ER12a ExonRegion 0 168.55 105.98 149.24 102.32 455.05 56.39 264.16 47 E12_Da KnownBoundary 0 125.58 66.28 112.13 72.47 252.66 51.70 130.70 48 ER12b ExonRegion 0 64.67 45.22 66.64 52.48 120.22 40.79 92.69 49 ER12c ExonRegion 0 0.51 4.45 2.26 1.25 4.05 1.63 3.82 50 ER12d ExonRegion 0 0.00 2.43 0.68 0.00 1.62 1.23 2.02 51 IG9 Intergenic 0 7.69 4.67 6.67 3.77 11.67 1.58 13.30 52 IG9_AR1 ActiveIntergenicRegion 0 7.78 4.71 6.74 3.81 11.79 1.59 13.44