Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	STK11IP	Gene	0	27.27	30.93	26.06	35.04	33.13	15.77	32.44
2	295641	Transcript	0	29.32	31.87	28.03	35.57	34.37	16.05	33.95
3	ER1a	ExonRegion	0	18.41	11.69	12.38	13.37	37.08	6.52	14.98
4	E1a_E2a	KnownJunction	0	40.67	22.51	34.96	31.48	53.09	12.84	29.97
5	ER2a	ExonRegion	0	20.71	15.54	14.32	25.20	17.03	8.75	19.38
6	E2a_E3a	KnownJunction	0	6.84	11.87	5.60	26.22	10.07	5.17	10.16
7	ER3a	ExonRegion	0	36.06	23.27	27.97	43.09	36.95	15.83	36.75
8	E3_Da	NovelBoundary	0	17.61	14.50	11.57	10.08	8.60	7.26	6.78
9	E3a_E4a	KnownJunction	0	28.31	22.17	31.69	26.82	32.71	16.24	41.91
10	I3	Intron	0	8.93	7.97	5.73	2.54	0.22	1.49	5.23
11	I3_AR1	ActiveIntronRegion	0	9.01	8.06	5.79	2.56	0.23	1.51	5.28
12	ER4a	ExonRegion	0	35.87	33.16	39.78	35.43	40.03	23.67	42.15
13	E4a_E5a	KnownJunction	0	40.12	34.78	40.04	34.11	37.46	25.57	37.75
14	E5_Aa	NovelBoundary	1	5.16	3.60	7.96	10.19	3.97	0.00	8.05
15	ER5a	ExonRegion	0	34.90	48.99	32.00	39.19	32.87	26.84	39.56
16	E5a_E6a	KnownJunction	0	32.24	42.11	28.50	35.60	22.32	16.59	40.43
17	ER6a	ExonRegion	0	36.03	42.43	37.59	46.33	31.31	24.07	41.11
18	E6a_E7a	KnownJunction	0	38.00	37.25	42.11	45.16	44.15	27.34	40.53
19	ER7a	ExonRegion	0	41.25	45.44	40.98	52.15	46.44	26.84	42.60
20	E7a_E8a	KnownJunction	0	43.41	42.59	39.92	59.65	41.61	29.10	38.98
21	ER8a	ExonRegion	0	35.79	38.43	45.45	46.25	36.42	23.09	37.44
22	E8a_E9a	KnownJunction	0	41.04	37.94	50.76	50.99	46.47	23.32	51.05
23	ER9a	ExonRegion	0	35.81	36.05	35.10	41.39	42.25	23.40	38.45
24	E9a_E10a	KnownJunction	0	18.66	41.48	26.28	42.05	17.87	15.06	27.69
25	ER10a	ExonRegion	0	18.51	33.56	22.32	37.64	23.60	15.45	26.66
26	E10_Da	NovelBoundary	1	2.59	0.00	3.92	4.77	0.88	1.58	8.74
27	E10a_E11a	KnownJunction	0	28.21	33.31	21.05	31.75	24.27	10.08	28.81
28	ER11a	ExonRegion	0	31.69	40.50	23.11	36.76	35.17	16.17	36.62
29	E11a_E12a	KnownJunction	0	22.25	37.31	23.80	37.30	36.93	22.35	33.12
30	E12_Aa	NovelBoundary	1	1.99	9.09	3.35	4.69	2.90	0.00	4.37
31	ER12a	ExonRegion	0	22.60	39.10	20.62	37.40	21.97	15.82	31.95
32	E12a_E13a	KnownJunction	0	18.74	28.79	17.50	28.64	15.33	11.90	30.14
33	ER13a	ExonRegion	0	24.24	31.80	24.53	31.85	23.30	11.47	37.57
34	E13a_E14a	KnownJunction	0	27.29	28.92	25.59	28.58	6.73	18.20	36.49
35	ER14a	ExonRegion	0	13.62	20.08	14.94	25.40	19.14	12.28	21.55
36	E14a_E15a	KnownJunction	0	26.44	22.96	18.95	40.69	28.61	12.01	24.56
37	E15_Aa	NovelBoundary	1	0.80	10.53	1.48	1.49	1.18	0.00	3.00
38	ER15a	ExonRegion	0	34.59	31.07	25.00	34.29	36.35	9.61	31.10
39	E15a_E16a	KnownJunction	0	37.77	28.45	19.74	25.93	49.89	10.75	34.93
40	ER16a	ExonRegion	0	36.95	32.02	28.54	26.72	40.64	11.26	29.51
41	E16a_E17a	KnownJunction	0	29.32	33.47	22.75	30.91	46.11	11.18	24.35
42	ER17a	ExonRegion	0	32.18	34.87	27.66	33.57	49.56	18.25	34.26
43	E17a_E18a	KnownJunction	0	53.57	34.42	50.64	30.18	59.52	12.17	49.72
44	ER18a	ExonRegion	0	58.91	43.32	48.70	42.36	61.49	17.52	53.80
45	E18a_E19a	KnownJunction	0	43.76	43.79	36.24	42.75	55.26	9.92	35.44
46	ER19a	ExonRegion	0	44.63	38.95	33.86	41.61	46.11	14.79	36.53
47	E19a_E20a	KnownJunction	0	48.18	28.79	28.44	36.63	44.81	12.60	41.15
48	ER20a	ExonRegion	0	27.24	33.93	32.18	35.05	42.43	15.61	44.65
49	E20a_E21a	KnownJunction	0	25.82	34.97	28.91	51.18	43.92	22.11	46.52
50	ER21a	ExonRegion	0	20.17	26.69	22.17	37.20	32.60	15.21	31.51
51	E21a_E22a	KnownJunction	0	23.37	31.29	34.70	22.16	41.56	19.78	41.76
52	ER22a	ExonRegion	0	17.32	28.95	21.15	30.75	24.90	14.19	25.25
53	E22a_E23a	KnownJunction	0	9.75	23.59	13.44	36.44	21.09	8.39	16.62
54	ER23a	ExonRegion	0	12.46	19.68	18.45	29.94	24.16	10.93	24.87
55	E23_Da	NovelBoundary	0	6.28	23.72	3.97	15.23	4.03	9.19	7.29
56	E23a_E24a	KnownJunction	1	11.25	18.68	20.35	24.76	34.60	11.36	34.67
57	I23_SR1	SilentIntronRegion	1	2.83	7.59	0.77	4.72	0.58	0.35	1.13
58	ER24a	ExonRegion	0	16.28	32.33	18.89	34.32	30.42	15.41	28.87
59	E24a_E25a	KnownJunction	0	23.05	34.99	27.48	35.08	15.88	15.14	34.83
60	ER25a	ExonRegion	0	12.52	23.46	16.46	30.48	21.54	14.38	24.80