Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PLCD4	Gene	0	11.30	10.23	16.74	14.81	14.25	14.53	23.44
2	251959	Transcript	0	4.12	2.20	5.32	4.73	3.84	6.22	9.62
3	396797	Transcript	0	4.29	6.48	9.18	10.59	9.08	6.48	14.29
4	IG2	Intergenic	0	40.86	31.39	55.05	42.73	119.08	73.94	52.22
5	IG2_AR1	ActiveIntergenicRegion	0	102.15	77.72	137.10	104.97	300.38	181.25	129.93
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.83	0.00	0.68	0.82
7	ER1b	ExonRegion	0	0.28	0.00	0.23	2.43	0.46	4.09	1.80
8	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	1.65	2.05	0.00	2.98
9	ER2a	ExonRegion	0	0.77	0.00	0.68	5.51	1.22	3.05	5.42
10	E2a_E3a	KnownJunction	1	0.78	0.00	0.72	8.51	1.11	4.98	9.04
11	ER3a	ExonRegion	1	0.92	0.00	0.23	6.48	0.49	3.09	8.82
12	E3_Da	KnownBoundary	0	0.93	0.00	0.00	4.33	0.00	2.95	6.94
13	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER3b	ExonRegion	0	0.19	0.88	0.26	1.40	0.13	3.87	4.11
15	E3b_E4a	KnownJunction	0	0.00	0.00	0.89	2.84	1.08	1.02	5.53
16	ER4a	ExonRegion	0	0.77	0.41	0.43	2.52	1.06	4.16	4.77
17	E4_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	2.63	0.92	0.00	2.02
19	ER4b	ExonRegion	0	0.00	1.14	0.00	0.00	0.51	0.97	0.01
20	E4b_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER5a	ExonRegion	0	1.58	0.00	1.56	2.30	1.06	7.34	5.47
22	E5a_E6a	KnownJunction	0	0.63	0.00	0.89	0.00	1.18	2.95	5.99
23	ER6a	ExonRegion	1	0.76	4.81	2.86	5.33	1.36	9.72	8.64
24	E6a_E7a	KnownJunction	0	1.35	0.00	1.71	0.00	2.26	1.66	9.30
25	ER7a	ExonRegion	1	1.85	2.07	1.18	1.33	0.17	4.53	7.93
26	E7a_E8a	KnownJunction	0	0.00	2.42	0.86	0.00	0.00	2.25	4.03
27	ER8a	ExonRegion	1	1.88	4.02	1.54	1.51	1.42	2.38	8.24
28	E8a_E9a	KnownJunction	0	0.00	0.00	2.26	3.09	0.00	0.00	6.76
29	ER9a	ExonRegion	0	0.76	2.76	1.54	4.53	0.76	7.34	6.57
30	E9a_E10a	KnownJunction	0	0.00	2.63	2.53	2.84	1.98	4.05	5.80
31	ER10a	ExonRegion	0	1.55	4.26	3.06	6.54	0.66	9.29	8.41
32	E10a_E11a	KnownJunction	1	0.00	3.21	3.05	5.53	1.18	6.62	11.91
33	I10_AR3	ActiveIntronRegion	0	7.12	7.73	8.47	6.79	9.43	10.03	10.48
34	E11_Aa	NovelBoundary	0	22.56	22.41	24.16	23.49	27.36	17.96	25.11
35	ER11a	ExonRegion	0	12.65	20.37	21.37	25.84	21.09	26.44	35.77
36	E11_Da	KnownBoundary	0	18.16	26.01	21.57	21.89	31.17	18.36	25.81
37	E11a_E11b	KnownJunction	1	0.00	0.00	0.80	0.00	0.00	5.01	10.72
38	ER11b	ExonRegion	0	15.35	26.85	32.64	37.35	30.78	27.65	47.57
39	E11_Ab	KnownBoundary	0	20.75	22.20	45.44	25.38	30.64	35.46	59.06
40	ER11c	ExonRegion	0	15.94	19.36	37.24	24.12	27.00	34.82	59.00
41	E11_Db	NovelBoundary	0	14.75	13.74	21.17	29.10	25.70	22.43	30.84
42	E11b_E12a	KnownJunction	0	0.93	2.55	3.22	5.28	0.00	11.52	6.22
43	I11	Intron	1	18.50	14.44	27.79	24.83	32.87	16.92	39.62
44	I11_AR1	ActiveIntronRegion	1	18.65	14.56	28.01	25.04	33.12	17.06	39.95
45	E12_Aa	NovelBoundary	0	49.17	35.07	52.15	39.80	20.89	19.83	60.03
46	ER12a	ExonRegion	0	24.37	21.97	26.50	25.68	35.66	26.20	27.39
47	E12_Da	NovelBoundary	0	25.27	23.54	37.39	24.60	29.28	12.89	30.78
48	E12a_E13a	KnownJunction	1	0.00	1.63	2.01	2.22	0.00	9.86	8.99
49	I12	Intron	0	7.31	6.90	12.42	9.05	14.12	4.99	11.60
50	I12_AR1	ActiveIntronRegion	0	13.88	8.96	20.87	13.87	21.47	10.52	18.69
51	I12_AR4	ActiveIntronRegion	1	6.48	13.88	14.81	13.72	3.93	3.68	13.40
52	I12_AR5	ActiveIntronRegion	0	6.47	10.71	9.94	8.11	22.55	1.93	6.53
53	E13_Aa	NovelBoundary	0	19.71	27.32	31.21	31.26	17.80	15.52	50.89
54	ER13a	ExonRegion	0	7.55	10.70	10.85	9.99	14.33	14.57	22.20
55	E13_Da	NovelBoundary	0	17.84	23.57	30.41	15.47	13.42	25.30	52.74
56	E13a_E14a	KnownJunction	1	0.88	1.50	1.09	7.02	0.88	15.97	10.20
57	I13	Intron	1	10.13	3.70	18.82	9.36	31.14	4.59	25.51
58	I13_SR1	SilentIntronRegion	0	6.34	1.52	7.54	1.87	8.67	2.81	9.87
59	I13_AR1	ActiveIntronRegion	1	19.83	3.89	29.84	9.66	45.92	7.79	40.44
60	I13_AR2	ActiveIntronRegion	1	9.23	3.95	18.73	10.21	31.91	4.37	25.43
61	E14_Aa	NovelBoundary	1	15.35	5.41	22.29	22.00	19.85	6.27	35.14
62	ER14a	ExonRegion	1	9.60	4.69	21.04	22.03	23.73	17.80	38.28
63	E14_Da	KnownBoundary	1	8.93	2.34	14.40	18.94	10.97	5.01	28.76
64	E14a_E14b	KnownJunction	1	0.00	0.00	0.00	7.59	0.90	13.29	8.47
65	ER14b	ExonRegion	1	6.09	4.43	13.24	15.59	14.11	3.77	23.87
66	E14_Ab	KnownBoundary	1	5.46	7.15	9.36	6.75	11.18	6.59	23.65
67	ER14c	ExonRegion	0	18.05	8.57	25.94	24.73	23.94	22.09	32.65
68	E14_Db	KnownBoundary	0	37.10	10.51	33.07	18.29	36.19	20.07	32.36
69	ER14d	ExonRegion	0	34.65	18.92	43.47	24.99	29.26	21.81	43.47
70	IG3	Intergenic	0	21.92	16.88	31.74	20.78	27.06	14.09	34.98
71	IG3_AR1	ActiveIntergenicRegion	0	19.03	13.81	28.38	19.50	24.04	13.96	30.48
72	IG3_SR1	SilentIntergenicRegion	0	28.69	23.75	38.80	25.32	31.59	16.58	45.77
73	IG3_AR2	ActiveIntergenicRegion	0	16.69	12.17	28.15	14.14	29.23	7.68	26.08