Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ALS2	Gene	0	42.68	21.47	92.44	59.29	102.75	18.25	80.82
2	264276	Transcript	0	39.68	17.23	89.91	53.62	102.49	15.02	78.94
3	409632	Transcript	0	0.00	1.29	0.00	0.00	2.27	1.27	0.01
4	410052	Transcript	0	1.65	1.16	3.13	0.60	0.73	0.00	1.71
5	409666	Transcript	0	0.97	1.04	1.65	0.00	1.20	1.98	1.03
6	ER1a	ExonRegion	0	0.00	0.57	2.07	0.00	2.25	0.00	0.22
7	E1_Ab	KnownBoundary	0	0.00	0.00	2.82	0.00	1.18	0.00	0.00
8	E1_Ac	KnownBoundary	0	0.00	1.63	0.72	0.00	2.35	0.00	0.79
9	ER1b	ExonRegion	0	0.15	1.21	3.66	0.00	3.56	0.00	0.67
10	ER1c	ExonRegion	0	7.13	4.25	14.19	3.68	13.69	0.40	1.96
11	E1_Ad	KnownBoundary	1	16.04	5.65	33.66	9.59	33.89	1.15	3.73
12	ER1d	ExonRegion	1	26.40	13.22	47.24	23.25	59.05	4.65	19.76
13	E1a_E2a	KnownJunction	0	0.82	0.00	1.75	0.00	0.00	0.00	1.36
14	E1a_E3a	KnownJunction	0	40.51	21.28	69.64	39.58	85.57	9.38	34.11
15	E2_Aa	NovelBoundary	0	4.57	11.82	24.06	6.31	4.66	7.18	9.77
16	ER2a	ExonRegion	0	4.12	3.48	7.64	1.79	2.18	0.00	2.56
17	E2_Da	NovelBoundary	0	14.12	4.28	21.50	7.78	13.58	4.90	11.02
18	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	1.22
19	ER3a	ExonRegion	0	32.58	19.35	62.27	47.26	61.07	12.96	49.62
20	E3a_E4a	KnownJunction	0	13.59	17.23	28.37	25.66	21.25	15.20	13.73
21	ER4a	ExonRegion	0	41.78	31.10	92.49	68.49	60.98	25.38	57.11
22	E4a_E5a	KnownJunction	0	0.00	2.94	0.00	0.00	3.23	2.63	0.00
23	E4a_E6a	KnownJunction	0	0.00	1.52	0.63	0.00	1.04	3.00	0.00
24	E4a_E7a	KnownJunction	0	34.68	23.15	94.74	74.18	153.12	29.29	83.24
25	ER5a	ExonRegion	0	0.00	0.92	0.00	0.00	2.60	1.19	0.02
26	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.99	0.00	0.00
27	ER6a	ExonRegion	0	1.93	0.57	2.67	0.00	1.36	0.95	2.07
28	ER7a	ExonRegion	0	40.28	29.18	94.81	85.26	71.39	29.92	82.21
29	E7_Da	KnownBoundary	0	43.76	39.91	101.44	84.12	72.87	32.75	81.33
30	ER7b	ExonRegion	0	49.27	41.83	119.05	92.58	113.78	26.30	115.58
31	E7_Db	KnownBoundary	0	49.80	46.19	142.60	101.78	177.25	29.37	134.06
32	ER7c	ExonRegion	0	82.97	43.25	165.12	110.02	174.80	28.17	145.78
33	E7_Dc	NovelBoundary	0	26.12	7.17	38.40	10.73	36.56	3.11	25.97
34	E7c_E8a	KnownJunction	0	62.00	22.70	135.04	84.25	162.27	19.54	123.44
35	I7_AR1	ActiveIntronRegion	0	8.45	2.88	21.71	6.27	14.20	2.20	11.52
36	ER8a	ExonRegion	0	29.19	20.17	77.93	62.93	63.19	14.19	67.29
37	E8a_E9a	KnownJunction	1	15.86	10.01	60.47	49.33	54.52	4.98	53.97
38	ER9a	ExonRegion	0	16.91	12.08	53.27	43.53	61.10	9.42	59.75
39	E9a_E10a	KnownJunction	0	36.67	10.09	53.70	48.20	69.60	7.75	64.94
40	ER10a	ExonRegion	0	46.03	18.97	67.50	61.54	91.94	8.83	68.59
41	E10a_E11a	KnownJunction	1	54.86	16.24	82.39	68.19	76.28	8.44	68.35
42	ER11a	ExonRegion	0	52.04	24.58	91.91	78.61	93.31	16.91	76.89
43	E11a_E12a	KnownJunction	0	59.62	33.02	101.12	89.16	80.85	19.97	77.29
44	ER12a	ExonRegion	0	60.98	23.45	114.71	62.31	114.44	19.28	77.16
45	E12a_E13a	KnownJunction	1	54.19	22.33	126.16	43.94	78.70	15.79	57.45
46	ER13a	ExonRegion	0	50.20	16.96	129.08	46.67	93.38	21.78	76.01
47	E13a_E14a	KnownJunction	0	36.95	12.51	102.22	51.99	77.71	25.94	61.65
48	ER14a	ExonRegion	0	29.18	10.68	92.29	44.78	75.62	16.00	63.37
49	E14_Da	NovelBoundary	0	6.96	9.22	19.39	9.08	8.83	6.57	10.56
50	E14a_E15a	KnownJunction	1	38.04	7.15	110.34	34.03	93.16	20.90	59.85
51	ER15a	ExonRegion	0	36.24	9.77	104.96	38.18	94.53	18.26	63.27
52	E15a_E16a	KnownJunction	0	35.53	10.27	101.40	46.89	69.46	16.35	62.37
53	ER16a	ExonRegion	0	51.51	25.07	126.86	55.33	109.01	17.47	81.88
54	E16a_E17a	KnownJunction	0	61.92	11.90	123.70	62.72	99.47	13.91	79.15
55	ER17a	ExonRegion	0	43.91	15.49	103.27	57.78	89.64	15.60	83.90
56	E17a_E18a	KnownJunction	0	45.85	15.63	105.08	55.29	89.47	23.26	108.39
57	ER18a	ExonRegion	0	35.78	18.11	80.67	44.97	107.51	11.21	87.83
58	E18a_E19a	KnownJunction	0	23.10	13.14	64.71	36.84	80.78	10.34	81.33
59	ER19a	ExonRegion	1	15.92	12.68	47.18	28.14	61.83	9.15	66.22
60	E19a_E20a	KnownJunction	0	17.34	19.44	50.27	34.60	82.02	10.37	63.33
61	ER20a	ExonRegion	0	18.01	20.38	51.54	40.16	78.76	13.30	63.42
62	E20a_E21a	KnownJunction	1	17.41	18.65	58.17	40.53	66.81	13.67	72.55
63	ER21a	ExonRegion	0	22.18	21.29	64.78	46.86	90.89	14.34	73.99
64	E21a_E22a	KnownJunction	0	26.89	24.70	64.58	51.09	104.98	10.77	54.36
65	ER22a	ExonRegion	0	38.53	20.10	73.93	45.78	121.06	11.18	69.72
66	E22a_E23a	KnownJunction	0	42.76	12.48	81.57	47.71	114.18	15.30	87.65
67	ER23a	ExonRegion	0	47.28	24.33	116.51	68.29	141.88	17.21	97.63
68	E23a_E24a	KnownJunction	0	62.29	17.50	114.55	89.05	141.31	18.28	79.25
69	E24_Aa	NovelBoundary	1	27.05	0.00	42.72	0.00	1.18	0.00	1.66
70	ER24a	ExonRegion	0	63.46	22.18	109.57	77.77	160.56	15.12	102.17
71	E24a_E25a	KnownJunction	0	47.62	21.12	108.04	68.97	142.01	13.43	82.69
72	ER25a	ExonRegion	0	62.61	19.94	114.79	66.39	147.94	9.97	102.01
73	E25a_E26a	KnownJunction	0	76.37	15.11	148.29	65.26	163.88	9.81	79.34
74	ER26a	ExonRegion	1	50.60	9.75	123.83	64.15	124.54	8.96	81.88
75	E26a_E27a	KnownJunction	0	38.97	10.30	87.76	41.77	129.00	11.55	82.18
76	ER27a	ExonRegion	0	44.44	14.09	108.44	44.86	105.02	11.98	77.58
77	E27a_E28a	KnownJunction	0	24.65	11.56	69.24	35.60	74.00	6.70	74.57
78	ER28a	ExonRegion	0	26.48	19.33	65.60	36.35	70.40	10.73	71.55
79	E28a_E29a	KnownJunction	0	17.74	7.28	41.72	26.44	52.95	10.16	51.03
80	ER29a	ExonRegion	0	27.86	15.49	65.49	39.79	78.63	13.09	71.04
81	E29a_E30a	KnownJunction	0	35.70	9.54	78.40	36.27	112.43	13.19	69.68
82	ER30a	ExonRegion	0	38.99	16.75	91.58	59.93	105.61	19.52	75.24
83	E30a_E31a	KnownJunction	0	46.75	19.62	103.06	69.73	81.40	25.19	73.42
84	ER31a	ExonRegion	0	36.70	23.72	83.08	61.57	89.14	20.92	73.18
85	E31a_E32a	KnownJunction	0	41.67	20.28	94.36	60.36	113.10	18.73	91.35
86	ER32a	ExonRegion	0	34.97	20.58	90.85	51.95	108.36	18.32	89.02
87	E32a_E33a	KnownJunction	0	29.84	16.16	76.45	35.11	97.93	19.30	62.24
88	ER33a	ExonRegion	0	35.70	18.25	93.71	36.92	115.81	16.92	80.88
89	E33a_E34a	KnownJunction	0	26.75	18.78	75.11	36.71	144.61	15.17	79.60
90	ER34a	ExonRegion	0	41.79	19.12	106.48	59.49	175.08	24.40	128.23
91	E34a_E35a	KnownJunction	0	43.28	10.69	95.30	54.89	128.22	19.16	108.96
92	ER35a	ExonRegion	0	39.45	14.59	89.17	59.57	120.13	11.23	99.11
93	E35a_E36a	KnownJunction	1	41.41	8.17	86.93	58.03	123.03	12.03	110.62
94	ER36a	ExonRegion	0	35.97	22.23	90.13	68.11	150.36	15.37	110.31
95	E36a_E37a	KnownJunction	0	29.94	25.22	80.88	73.82	107.03	15.44	101.58
96	ER37a	ExonRegion	0	52.54	22.58	97.44	65.10	126.25	26.99	86.49