Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PK4P	Gene	0	148.63	127.30	147.10	262.43	244.28	109.15	144.26
2	389759	Transcript	0	31.01	28.50	22.44	62.06	88.23	33.79	29.59
3	389757	Transcript	0	194.59	87.64	153.36	180.59	228.15	89.38	183.36
4	389756	Transcript	0	53.35	66.56	56.76	142.17	54.32	49.62	64.30
5	ER1a	ExonRegion	0	10.31	16.21	8.85	32.04	12.54	7.69	5.31
6	E1a_E2a	KnownJunction	0	32.86	57.38	25.52	106.50	66.81	26.00	20.87
7	ER2a	ExonRegion	0	59.90	137.37	62.07	264.65	97.39	63.78	61.32
8	E2a_E3a	KnownJunction	0	105.06	169.06	107.25	282.59	123.75	103.88	93.67
9	E2a_E4a	NovelJunction	0	4.04	24.62	20.41	36.27	17.08	25.51	5.59
10	ER3a	ExonRegion	0	129.23	223.72	123.49	367.60	158.86	108.65	132.15
11	E3a_E4a	KnownJunction	0	106.53	159.02	115.42	266.79	221.10	79.11	119.97
12	ER4a	ExonRegion	0	137.31	218.60	173.35	377.05	263.57	135.28	167.95
13	E4a_E5a	KnownJunction	0	125.49	193.59	165.99	378.52	248.51	145.47	155.88
14	E5_Aa	NovelBoundary	1	66.54	3.13	79.11	1.22	4.61	0.00	3.60
15	ER5a	ExonRegion	0	159.36	222.93	190.36	385.89	271.68	154.83	190.57
16	E5a_E6a	KnownJunction	0	160.97	205.05	201.70	328.40	184.05	108.32	182.34
17	ER6a	ExonRegion	0	142.88	172.29	181.85	276.79	229.29	115.17	170.47
18	E6_Ab	KnownBoundary	0	174.19	246.95	211.40	409.70	282.28	165.19	207.32
19	ER6b	ExonRegion	0	183.50	275.30	228.15	491.34	346.38	198.84	256.55
20	E6a_E7a	KnownJunction	0	158.49	251.00	172.80	447.87	229.05	162.57	192.66
21	E6a_E8a	NovelJunction	0	2.40	12.53	4.89	18.23	0.00	2.84	2.79
22	E7_Aa	NovelBoundary	1	39.51	13.63	58.88	6.53	0.00	2.73	3.28
23	ER7a	ExonRegion	0	112.19	159.02	113.36	332.04	206.01	120.16	153.24
24	E7a_E8a	KnownJunction	0	117.78	149.25	136.62	340.32	209.80	126.79	152.79
25	E7a_E8b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER8a	ExonRegion	0	126.41	154.89	127.35	352.89	234.05	148.96	180.45
27	ER8b	ExonRegion	0	157.67	171.85	153.14	380.41	294.72	157.15	208.88
28	E8_Da	KnownBoundary	0	65.02	82.68	55.41	159.73	144.59	77.53	89.39
29	E8a_E8c	KnownJunction	0	124.74	138.61	132.01	306.89	162.96	120.30	149.59
30	E8_Ac	KnownBoundary	0	115.08	68.33	92.73	194.65	93.83	64.80	104.88
31	ER8c	ExonRegion	0	203.12	179.39	180.41	438.93	334.20	174.09	247.13
32	ER8d	ExonRegion	0	195.85	186.41	193.30	386.85	316.07	158.44	200.52
33	E8b_E9a	KnownJunction	0	153.36	199.98	184.06	334.06	280.71	152.04	176.49
34	ER9a	ExonRegion	0	162.66	156.56	168.70	296.56	300.71	117.04	167.58
35	E9_Da	NovelBoundary	1	24.55	38.20	21.38	26.06	4.50	14.26	6.99
36	E9a_E10a	KnownJunction	0	104.48	83.28	109.65	174.36	220.98	57.70	124.61
37	E9a_E11a	NovelJunction	0	5.39	8.46	2.96	12.60	0.00	7.72	4.83
38	E9a_E12a	NovelJunction	0	0.67	4.62	2.70	11.24	0.00	8.92	0.89
39	ER10a	ExonRegion	0	131.59	107.46	123.11	229.79	272.66	65.15	144.11
40	E10a_E11a	KnownJunction	1	132.79	139.11	127.26	234.37	290.40	51.35	129.03
41	ER11a	ExonRegion	0	201.06	132.96	208.80	263.00	354.30	82.21	172.92
42	E11a_E12a	KnownJunction	0	187.71	113.15	207.15	192.86	323.50	58.02	161.03
43	ER12a	ExonRegion	0	200.14	127.91	228.83	261.00	342.60	82.75	186.67
44	E12a_E13a	KnownJunction	0	128.68	105.11	150.97	242.41	245.65	86.83	159.82
45	ER13a	ExonRegion	0	115.31	105.86	130.35	228.37	209.94	89.85	148.20
46	E13a_E14a	KnownJunction	0	72.40	108.37	108.67	219.95	243.32	117.78	137.60
47	Ix_AR1	ActiveIntronRegion	0	29.75	15.43	19.00	22.78	10.96	5.63	5.75
48	ER14a	ExonRegion	0	64.48	118.65	95.59	237.55	212.16	95.87	123.00
49	E14_Da	KnownBoundary	0	30.93	59.53	50.21	108.20	115.73	32.29	48.50
50	E14a_E14b	KnownJunction	0	35.32	61.08	38.27	119.61	0.00	28.57	43.31
51	E14_Ab	KnownBoundary	0	31.91	30.26	27.39	88.48	45.53	20.23	32.76
52	ER14b	ExonRegion	0	59.02	114.68	79.66	242.16	167.15	71.84	102.81
53	ER14c	ExonRegion	0	76.11	108.67	95.10	243.64	171.32	86.66	101.05
54	E14_Db	KnownBoundary	0	89.94	92.00	115.19	206.16	216.26	105.32	109.32
55	ER14d	ExonRegion	0	118.28	127.00	132.00	251.02	164.34	104.87	127.36
56	E14c_E15a	KnownJunction	0	104.48	135.01	129.48	244.93	169.78	88.49	126.78
57	ER15a	ExonRegion	0	123.54	117.31	148.84	228.19	188.59	100.01	137.64
58	E15a_E16a	KnownJunction	0	126.81	129.02	130.48	238.18	186.04	115.91	130.99
59	ER16a	ExonRegion	0	119.14	106.66	134.27	212.16	184.14	95.88	127.79
60	E16a_E17a	KnownJunction	0	75.12	86.14	84.61	155.94	238.87	64.32	127.26
61	E16a_E18a	NovelJunction	1	6.21	8.07	6.18	22.51	2.19	1.55	2.51
62	ER17a	ExonRegion	0	105.70	93.46	114.32	212.38	234.68	104.48	128.94
63	E17a_E18a	KnownJunction	0	117.71	98.68	142.47	244.77	256.62	127.86	159.42
64	ER18a	ExonRegion	0	159.85	116.33	165.58	257.65	287.75	145.52	184.56
65	E18a_E19a	KnownJunction	0	173.79	114.86	167.04	275.65	287.22	146.27	184.85
66	ER19a	ExonRegion	0	197.89	149.94	197.04	314.76	430.25	155.61	210.40
67	E19a_E20a	KnownJunction	0	32.08	32.89	24.07	65.13	89.74	55.18	30.83
68	E19a_E21a	KnownJunction	0	194.59	87.64	153.36	180.59	228.15	89.38	183.36
69	E19a_E22a	NovelJunction	0	23.20	15.40	21.79	47.38	105.37	11.47	6.09
70	ER20a	ExonRegion	0	26.60	31.35	24.36	69.60	90.41	33.62	27.94
71	E20a_E21a	KnownJunction	0	34.35	21.25	18.90	51.45	84.53	12.57	30.00
72	ER21a	ExonRegion	0	274.59	121.17	189.53	277.06	301.69	127.44	231.61
73	E21a_E22a	KnownJunction	0	281.99	130.88	182.66	296.11	239.75	134.43	193.83
74	E22_Aa	NovelBoundary	1	118.62	0.00	74.67	2.82	0.00	1.10	0.00
75	ER22a	ExonRegion	0	214.83	96.18	180.14	235.91	292.37	128.13	139.79