Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 TBC1D8 Gene 0 194.73 238.89 29.99 15.92 63.40 42.30 68.33 2 409318 Transcript 1 17.85 18.72 2.38 2.29 3.14 4.20 7.93 3 376840 Transcript 0 155.46 186.66 26.14 11.61 39.31 37.82 40.55 4 IG42_AR11 ActiveIntergenicRegion 0 1.53 6.71 1.02 5.00 2.44 12.32 0.34 5 IG42_AR9 ActiveIntergenicRegion 0 14.81 5.75 8.02 6.43 1.78 13.62 3.08 6 IG42_SR8 SilentIntergenicRegion 0 5.79 4.25 3.63 3.58 0.42 11.38 1.67 7 IG42_AR8 ActiveIntergenicRegion 0 1.95 4.83 1.67 3.20 0.00 9.59 1.19 8 ER1a ExonRegion 0 14.33 37.84 2.43 5.02 2.85 4.67 4.85 9 E1a_E2a KnownJunction 0 51.39 103.64 3.41 6.75 10.67 14.87 16.98 10 ER2a ExonRegion 0 86.85 183.56 13.77 9.25 18.10 33.76 28.39 11 E2_Da KnownBoundary 0 36.78 31.08 3.46 4.52 6.27 4.98 8.99 12 E2a_E3a KnownJunction 0 79.09 219.08 17.79 9.92 20.77 40.71 31.94 13 ER2b ExonRegion 0 23.48 24.57 3.06 3.30 3.92 4.58 8.28 14 E2b_E3a KnownJunction 1 12.22 12.87 1.71 1.27 2.35 3.83 7.58 15 ER3a ExonRegion 0 123.74 280.31 26.15 13.16 34.36 37.17 48.51 16 E3a_E4a KnownJunction 0 130.88 248.42 23.21 16.69 44.38 30.66 50.83 17 ER4a ExonRegion 0 124.32 280.29 20.95 12.58 48.46 29.61 58.67 18 E4a_E5a KnownJunction 0 120.84 321.48 22.92 11.08 53.87 36.69 79.11 19 ER5a ExonRegion 0 138.36 347.66 21.83 20.40 55.23 50.51 78.43 20 E5a_E6a KnownJunction 0 112.99 287.44 19.83 33.11 57.42 41.94 70.77 21 ER6a ExonRegion 0 125.69 306.49 19.69 16.44 57.50 41.23 74.47 22 E6a_E7a KnownJunction 1 107.07 303.54 13.48 9.35 44.95 43.84 69.67 23 ER7a ExonRegion 0 131.45 301.12 18.92 9.25 54.78 33.32 82.83 24 E7a_E8a KnownJunction 1 131.83 269.10 18.77 5.74 58.55 16.70 71.63 25 ER8a ExonRegion 0 159.03 228.63 27.39 8.00 57.33 26.67 74.48 26 E8a_E9a KnownJunction 0 125.81 115.88 13.91 8.02 52.86 13.35 57.02 27 I8_AR1 ActiveIntronRegion 0 42.51 17.87 6.21 1.37 1.58 3.05 2.76 28 E9_Aa NovelBoundary 1 35.57 15.68 17.68 13.27 2.17 9.86 5.03 29 ER9a ExonRegion 0 162.53 190.60 25.44 13.03 67.46 19.28 75.76 30 E9_Da NovelBoundary 1 30.31 31.60 14.95 9.45 0.00 2.68 3.75 31 E9a_E10a KnownJunction 1 147.11 196.96 20.48 8.56 56.02 9.94 62.54 32 I9_SR1 SilentIntronRegion 0 40.66 34.62 7.00 7.40 0.98 7.77 4.66 33 E10_Aa NovelBoundary 1 83.37 19.89 11.93 1.33 0.00 2.36 1.93 34 ER10a ExonRegion 0 189.93 238.42 28.17 16.99 75.29 33.16 76.24 35 E10_Da NovelBoundary 1 133.00 69.78 14.38 6.99 27.20 16.40 7.97 36 E10a_E11a KnownJunction 0 82.48 131.80 15.48 8.64 62.57 21.09 69.69 37 I10 Intron 0 100.59 66.50 12.36 6.14 14.16 10.92 10.40 38 I10_AR1 ActiveIntronRegion 0 95.88 61.71 11.44 3.59 12.91 11.04 9.69 39 I10_SR1 SilentIntronRegion 0 93.07 58.89 13.50 4.79 11.44 7.44 9.95 40 I10_AR2 ActiveIntronRegion 0 111.96 77.88 11.69 9.06 17.90 14.74 11.34 41 E11_Aa NovelBoundary 1 98.65 85.36 12.73 13.09 30.68 13.11 16.35 42 ER11a ExonRegion 0 160.97 215.80 22.43 16.97 74.78 39.57 64.74 43 E11_Da NovelBoundary 0 52.87 20.57 12.93 9.08 8.76 4.31 6.66 44 E11a_E12a KnownJunction 0 152.86 226.54 23.38 21.10 68.10 40.60 69.49 45 E11a_E13a NovelJunction 0 3.49 14.21 2.93 0.00 2.14 3.22 2.87 46 I11_SR1 SilentIntronRegion 0 41.22 12.27 5.86 2.20 8.39 2.71 5.35 47 E12_Aa NovelBoundary 1 69.31 15.66 6.39 0.00 6.39 5.47 4.61 48 ER12a ExonRegion 0 207.00 307.67 36.34 19.95 95.20 45.82 96.18 49 E12a_E13a KnownJunction 0 166.25 263.19 24.20 18.86 71.21 54.91 91.78 50 ER13a ExonRegion 0 195.33 277.70 31.88 18.32 88.25 71.69 84.16 51 E13a_E14a KnownJunction 0 277.69 302.10 40.51 16.12 99.66 71.56 81.45 52 ER14a ExonRegion 0 216.27 302.11 37.50 25.86 69.01 64.49 85.48 53 E14a_E15a KnownJunction 0 181.57 275.59 21.25 23.92 48.99 64.11 75.13 54 ER15a ExonRegion 0 209.78 281.69 27.28 23.19 61.82 46.69 82.12 55 E15a_E16a KnownJunction 0 245.49 314.52 32.25 22.51 73.26 39.21 83.81 56 ER16a ExonRegion 0 240.11 250.40 32.14 19.79 78.17 41.46 80.30 57 E16a_E17a KnownJunction 0 249.26 259.14 37.28 20.91 82.81 60.78 96.82 58 ER17a ExonRegion 0 364.62 272.31 52.31 20.31 118.35 60.98 105.32 59 E17a_E18a KnownJunction 0 418.40 251.81 54.10 18.45 100.12 64.56 87.85 60 I17_SR1 SilentIntronRegion 0 43.46 18.85 5.52 4.90 8.44 4.91 3.18 61 I17_AR6 ActiveIntronRegion 0 29.77 9.81 4.96 0.67 46.69 1.30 2.71 62 Ix_AR4 ActiveIntronRegion 0 41.46 17.26 10.86 8.48 26.48 5.70 5.15 63 Ix_AR3 ActiveIntronRegion 0 40.46 19.13 10.46 6.34 15.59 5.55 3.88 64 Ix_AR1 ActiveIntronRegion 0 41.14 14.59 11.10 6.40 14.87 4.49 4.35 65 E18_Aa NovelBoundary 1 37.97 21.70 11.37 7.50 13.69 4.23 7.50 66 ER18a ExonRegion 0 442.28 288.52 57.75 15.84 101.37 81.00 85.19 67 E18_Da NovelBoundary 0 19.34 37.78 10.95 5.58 34.03 0.00 12.80 68 E18a_E19a KnownJunction 0 421.02 296.79 63.69 15.98 70.06 86.46 90.29 69 E19_Aa NovelBoundary 0 3.09 7.38 1.98 10.27 8.46 3.06 4.23 70 ER19a ExonRegion 0 488.00 299.49 70.02 24.81 81.37 74.74 90.40 71 E19_Da NovelBoundary 1 35.95 13.06 10.59 6.12 21.23 2.17 1.83 72 E19a_E20a KnownJunction 1 401.81 232.90 61.28 18.21 68.63 59.20 58.19 73 Ix_AR1 ActiveIntronRegion 0 45.41 14.04 2.67 3.02 14.44 2.64 2.35 74 E20_Aa NovelBoundary 1 26.82 19.10 11.19 4.20 18.00 5.49 3.15 75 ER20a ExonRegion 0 275.31 233.25 43.03 20.14 76.56 60.95 74.17 76 E20_Da KnownBoundary 0 343.11 249.37 39.83 22.32 116.81 65.15 77.72 77 ER20b ExonRegion 0 231.82 154.24 34.49 13.31 57.84 34.92 49.16