Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	GAS2L1	Gene	0	9.88	14.38	7.94	13.19	6.12	10.41	39.40
2	333679	Transcript	0	2.77	4.47	1.54	4.58	0.00	1.53	9.20
3	341313	Transcript	0	1.73	1.68	1.51	2.97	1.57	1.12	4.56
4	360113	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	407647	Transcript	0	0	0	0	0	0	0	0
6	406549	Transcript	0	0.00	0.00	0.00	1.68	0.00	0.00	0.83
7	403764	Transcript	0	2.10	2.07	0.08	0.04	0.13	0.59	1.93
8	407854	Transcript	0	0	0	0	0	0	0	0
9	ER1a	ExonRegion	0	0.00	0.00	0.00	1.03	0.00	0.00	0.00
10	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	2.04	0.00
11	ER1b	ExonRegion	0	0.00	0.80	0.00	3.53	1.31	1.90	0.51
12	E1_Ad	KnownBoundary	0	0.00	2.55	0.00	4.98	3.25	4.26	8.31
13	ER1c	ExonRegion	0	0.00	1.21	0.00	4.99	2.43	2.45	0.67
14	ER1d	ExonRegion	0	0.51	1.62	0.00	2.69	0.90	1.23	1.08
15	E1_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	1.08	0.00	0.00
16	E1a_E2a	KnownJunction	0	1.89	1.63	0.00	0.00	0.00	0.00	0.00
17	E1a_E2b	KnownJunction	0	0.00	1.63	0.70	2.36	0.00	1.53	6.08
18	ER1e	ExonRegion	0	0.00	0.00	0.00	0.00	0.66	0.00	0.00
19	E1b_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E2_Aa	NovelBoundary	0	5.86	0.00	2.47	0.00	7.61	0.00	6.03
21	E2_Ab	NovelBoundary	0	1.69	2.57	0.85	1.60	0.90	1.55	12.08
22	ER2a	ExonRegion	0	2.31	2.51	0.16	0.09	0.25	1.18	3.86
23	ER2b	ExonRegion	0	9.62	17.04	7.60	16.44	6.59	15.04	49.49
24	E2a_E3a	KnownJunction	1	14.60	24.64	14.18	25.66	11.02	8.84	96.79
25	ER3a	ExonRegion	0	14.39	27.13	17.29	26.79	9.94	15.10	84.49
26	E3a_E4a	KnownJunction	0	10.18	31.95	10.43	34.22	7.24	20.90	74.05
27	ER4a	ExonRegion	0	16.06	28.48	13.81	24.16	7.62	14.36	83.33
28	E4a_E5a	KnownJunction	1	18.91	35.97	15.19	18.18	8.39	9.84	87.12
29	E4a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER5a	ExonRegion	0	12.92	16.75	14.50	15.17	8.14	10.68	56.47
31	E5_Da	KnownBoundary	0	2.74	4.47	1.41	0.00	2.19	1.66	4.14
32	E5a_E5b	KnownJunction	0	7.63	8.67	4.80	7.02	7.24	4.02	29.42
33	E5a_E5d	KnownJunction	0	0.00	0.00	0.00	1.68	0.00	0.00	0.83
34	ER5b	ExonRegion	0	1.73	1.68	1.51	2.97	1.57	1.12	4.56
35	E5_Ab	KnownBoundary	0	3.04	0.00	2.14	1.65	2.31	0.00	5.49
36	ER5c	ExonRegion	0	4.25	8.28	3.34	5.24	2.80	6.82	15.57
37	E5_Db	KnownBoundary	0	0.00	0.00	1.51	0.00	0.00	1.21	6.92
38	E5b_E5c	KnownJunction	0	2.77	4.47	1.54	4.58	0.00	1.53	9.20
39	E5_Ac	KnownBoundary	0	0.00	2.65	0.68	0.00	0.00	3.00	2.15
40	ER5d	ExonRegion	1	0.51	6.07	2.71	0.83	0.00	5.31	10.34
41	ER5e	ExonRegion	0	11.28	19.61	9.87	15.96	6.80	12.74	43.49
42	E5_Ad	KnownBoundary	0	13.22	33.84	13.01	17.31	11.69	15.89	57.24
43	ER5f	ExonRegion	0	22.49	22.74	14.02	17.25	11.71	17.00	65.00
44	E5_Dc	KnownBoundary	0	24.77	26.64	18.55	28.82	14.27	22.06	67.31
45	ER5g	ExonRegion	0	10.69	12.35	7.72	16.18	7.36	8.82	36.21
46	ER5h	ExonRegion	0	0.00	2.43	1.13	1.25	3.24	4.90	4.27