Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TXNRD2	Gene	0	35.73	23.89	17.54	22.88	11.73	11.58	18.59
2	334361	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	361682	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	400502	Transcript	0	0	0	0	0	0	0	0
5	400525	Transcript	0	0	0	0	0	0	0	0
6	334363	Transcript	0	11.16	4.59	2.96	2.96	2.30	1.09	4.87
7	400521	Transcript	0	0	0	0	0	0	0	0
8	400516	Transcript	0	0	0	0	0	0	0	0
9	400519	Transcript	0	1.73	0.89	0.88	0.47	1.95	0.16	0.22
10	400518	Transcript	0	0.00	0.23	0.22	0.00	0.10	0.00	0.00
11	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E1_Ae	KnownBoundary	1	17.98	16.92	38.58	12.33	6.36	7.37	26.43
13	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER1c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER1d	ExonRegion	0	0.00	0.87	0.00	1.07	0.00	0.00	0.00
16	ER1e	ExonRegion	0	1.40	3.94	0.63	4.65	1.50	0.96	1.67
17	E1a_E3a	KnownJunction	0	5.89	2.92	1.64	1.22	2.35	1.18	1.88
18	E1a_E3b	KnownJunction	0	2.22	1.00	0.53	0.00	2.26	0.00	0.00
19	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER2a	ExonRegion	0	0.00	0.47	0.43	0.00	0.21	0.00	0.00
21	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER3a	ExonRegion	0	5.38	3.34	1.52	1.25	3.04	2.45	2.02
23	ER3b	ExonRegion	0	9.43	11.36	2.55	11.34	2.52	8.13	9.96
24	E3a_E4a	KnownJunction	1	12.92	14.06	3.94	19.78	0.00	10.37	16.01
25	ER4a	ExonRegion	0	22.11	23.81	10.48	30.01	3.54	7.87	14.19
26	E4a_E5a	KnownJunction	0	29.96	27.85	15.74	29.29	2.05	7.21	11.08
27	ER5a	ExonRegion	0	98.47	43.94	31.00	35.14	20.10	23.40	31.35
28	E5a_E6a	KnownJunction	0	205.29	73.69	72.48	70.57	34.63	37.12	57.53
29	ER6a	ExonRegion	1	273.60	106.05	97.74	86.04	27.58	41.42	71.72
30	E6a_E7a	KnownJunction	0	247.18	107.56	89.86	71.41	13.28	53.09	76.09
31	ER7a	ExonRegion	0	208.17	85.52	88.75	67.95	32.64	44.23	74.87
32	E7a_E8a	KnownJunction	0	249.31	84.49	98.93	52.75	44.28	30.47	85.30
33	ER8a	ExonRegion	0	217.32	73.68	80.97	62.66	38.08	34.41	79.00
34	E8a_E9a	KnownJunction	0	105.38	48.05	46.95	64.18	28.86	42.21	51.61
35	ER9a	ExonRegion	0	84.39	62.59	53.63	50.83	26.68	34.38	45.86
36	E9a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	E9a_E12a	KnownJunction	0	51.10	44.64	36.64	34.65	17.01	10.61	25.77
38	E9b_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER9b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	E10a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	E11a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	ER11a	ExonRegion	0	0.00	0.36	0.00	0.00	0.00	0.00	0.00
44	E12a_E13a	KnownJunction	1	44.56	34.55	14.26	34.24	6.64	13.59	45.44
45	ER12a	ExonRegion	0	70.70	62.44	38.48	47.88	14.90	18.64	50.80
46	ER13a	ExonRegion	0	62.69	59.42	29.58	47.85	11.65	28.49	52.15
47	E13a_E14a	KnownJunction	0	63.86	50.13	31.43	55.24	10.65	24.55	35.58
48	ER14a	ExonRegion	0	51.41	44.80	31.34	57.93	14.30	23.83	37.23
49	E14a_E15a	KnownJunction	0	14.85	5.75	3.72	5.36	3.94	1.63	6.15
50	E14a_E16a	KnownJunction	1	46.03	32.52	34.12	61.04	7.31	14.61	30.93
51	ER15a	ExonRegion	0	7.46	3.43	2.20	0.55	0.66	0.54	3.59
52	E15_Da	NovelBoundary	0	5.81	10.80	5.00	6.61	2.03	2.89	1.35
53	I15_SR3	SilentIntronRegion	1	2.92	7.93	1.79	1.97	0.12	0.00	1.29
54	ER16a	ExonRegion	0	46.05	37.76	30.13	44.44	10.73	19.68	33.43
55	E16a_E17a	KnownJunction	1	41.41	31.97	24.95	47.68	6.22	10.16	25.83
56	ER17a	ExonRegion	0	32.65	32.48	26.70	44.12	25.42	15.04	23.38
57	E17a_E18a	KnownJunction	0	56.63	47.10	32.33	39.07	51.38	15.60	26.48
58	ER18a	ExonRegion	0	40.18	43.90	23.88	52.96	38.94	15.96	28.97
59	E18a_E19a	KnownJunction	0	32.51	49.36	22.83	59.71	41.01	14.90	33.74
60	ER19a	ExonRegion	0	41.83	46.52	34.69	61.34	38.52	27.70	40.48
61	E19a_E20a	KnownJunction	0	53.62	53.94	44.79	63.80	40.67	37.06	46.75
62	ER20a	ExonRegion	0	45.80	56.81	38.72	52.84	41.67	22.57	40.58
63	E20a_E21a	KnownJunction	0	40.79	60.77	30.54	46.08	33.66	26.72	33.59
64	ER21a	ExonRegion	0	33.28	48.91	25.17	36.41	33.75	25.88	38.44
65	E21_Da	KnownBoundary	0	27.91	41.06	18.68	38.17	25.87	22.94	32.27
66	ER21b	ExonRegion	0	32.40	32.37	13.89	23.99	12.87	15.89	21.12
67	E21_Db	KnownBoundary	0	0.00	1.08	0.00	0.00	1.18	0.00	0.00
68	E21b_E21b	KnownJunction	0	38.62	40.48	19.34	27.42	10.30	17.29	24.02
69	ER21c	ExonRegion	0	1.24	0.79	1.22	0.94	1.64	0.33	0.43
70	E21_Ab	KnownBoundary	0	3.30	0.00	0.89	0.00	3.20	1.02	0.00
71	ER21d	ExonRegion	0	25.53	20.90	10.59	18.72	11.96	11.55	13.54
72	ER21e	ExonRegion	0	7.05	0.90	1.65	2.93	4.58	3.09	2.46
73	ER21f	ExonRegion	0	3.07	0.00	0.00	0.00	1.62	0.00	0.00
74	ER21g	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00