Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TOP3B	Gene	0	62.90	26.70	51.34	17.44	85.84	9.03	52.61
2	357179	Transcript	0	24.49	5.20	11.95	4.21	36.76	0.00	13.90
3	398789	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	403680	Transcript	0	0	0	0	0	0	0	0
5	398793	Transcript	0	7.15	1.46	5.20	1.39	3.79	0.44	1.77
6	ER1a	ExonRegion	0	0.48	0.00	0.39	0.00	0.00	0.00	0.42
7	ER1b	ExonRegion	0	20.85	4.41	12.97	3.82	38.29	0.00	11.38
8	E1_Ac	NovelBoundary	0	44.90	6.15	34.75	8.86	96.31	1.29	24.76
9	E1a_E2a	KnownJunction	1	71.33	15.26	34.00	12.62	107.63	0.00	41.00
10	E1a_E2b	KnownJunction	0	1.02	0.00	0.00	0.00	0.00	0.00	0.89
11	ER1c	ExonRegion	1	49.60	12.15	26.15	9.98	104.35	0.00	33.29
12	ER1d	ExonRegion	0	4.86	2.92	4.18	1.51	2.62	0.88	2.17
13	E1_Db	NovelBoundary	1	5.49	9.25	3.72	2.98	0.00	0.00	6.23
14	E1b_E2a	KnownJunction	0	9.43	0.00	6.21	1.27	4.96	0.00	1.38
15	I1	Intron	1	11.37	4.68	8.30	1.91	8.26	1.20	10.94
16	I1_SR1	SilentIntronRegion	1	9.83	4.58	7.09	1.60	7.98	0.95	10.70
17	I1_AR2	ActiveIntronRegion	0	25.58	5.56	18.67	3.75	12.24	2.45	15.02
18	E2_Ab	NovelBoundary	0	52.62	10.30	25.82	8.70	18.40	1.07	23.80
19	ER2a	ExonRegion	1	67.53	12.15	38.44	11.22	102.45	0.00	37.27
20	ER2b	ExonRegion	1	104.64	31.35	79.10	20.78	60.44	7.56	42.75
21	E2a_E3a	KnownJunction	1	204.75	35.49	126.42	31.21	107.43	11.31	68.53
22	ER3a	ExonRegion	1	174.91	53.77	101.65	26.51	189.46	24.13	70.09
23	E3a_E4a	KnownJunction	1	246.83	55.35	158.55	41.88	174.00	25.97	84.38
24	ER4a	ExonRegion	0	190.20	54.09	112.83	34.04	147.35	18.26	89.18
25	E4a_E5a	KnownJunction	0	164.61	43.51	79.74	25.38	192.40	7.85	88.53
26	E5_Aa	NovelBoundary	1	55.49	0.00	23.25	1.68	1.13	0.00	1.25
27	ER5a	ExonRegion	0	117.39	29.38	73.37	15.10	175.10	9.30	75.60
28	E5a_E6a	KnownJunction	0	63.54	19.31	53.82	9.70	115.15	4.85	58.69
29	E5a_E7a	NovelJunction	0	11.05	4.86	10.35	1.54	8.48	2.92	10.33
30	ER6a	ExonRegion	0	83.03	29.14	71.97	15.20	117.38	10.66	57.79
31	E6a_E7a	KnownJunction	0	104.28	21.78	94.04	17.93	138.85	8.44	52.62
32	E7_Aa	NovelBoundary	1	47.68	0.00	39.73	0.00	1.18	0.00	4.82
33	ER7a	ExonRegion	0	114.16	30.26	101.92	23.91	123.12	17.87	65.95
34	E7a_E8a	KnownJunction	0	77.36	18.94	78.03	20.40	114.85	9.65	53.77
35	ER8a	ExonRegion	0	84.00	28.11	93.00	19.94	140.85	14.11	82.34
36	E8a_E9a	KnownJunction	0	68.26	41.59	84.25	23.76	100.42	18.60	81.12
37	E9_Aa	NovelBoundary	1	28.27	0.00	32.92	0.00	0.00	0.00	3.65
38	ER9a	ExonRegion	0	63.68	38.27	68.97	24.02	98.76	15.29	67.33
39	E9a_E10a	KnownJunction	0	70.87	27.66	60.64	18.91	54.52	5.17	57.70
40	ER10a	ExonRegion	0	73.53	37.87	71.78	21.91	92.81	13.98	77.47
41	E10a_E11a	KnownJunction	0	64.02	31.37	48.18	21.92	50.35	13.56	48.10
42	ER11a	ExonRegion	0	65.71	28.54	45.12	18.16	71.25	8.07	62.68
43	E11a_E12a	KnownJunction	0	54.84	27.77	56.42	11.22	90.55	10.53	69.54
44	ER12a	ExonRegion	0	54.98	32.15	45.61	20.00	96.53	10.38	73.03
45	E12_Da	NovelBoundary	0	4.64	8.77	6.73	4.55	6.92	4.45	8.99
46	E12a_E13a	KnownJunction	0	48.53	28.11	42.51	15.09	70.47	7.99	73.43
47	E13_Aa	NovelBoundary	0	18.58	5.49	17.27	5.09	21.30	3.22	8.66
48	ER13a	ExonRegion	0	51.07	31.05	47.16	24.87	94.77	9.33	80.42
49	E13a_E14a	KnownJunction	0	45.43	24.04	45.63	20.13	99.93	8.68	78.21
50	I13_AR1	ActiveIntronRegion	1	4.77	6.96	6.66	2.62	4.75	4.15	11.88
51	ER14a	ExonRegion	0	57.48	32.48	58.95	23.76	137.35	10.21	83.17
52	E14a_E15a	KnownJunction	0	82.46	30.69	78.55	30.45	157.66	13.35	82.51
53	ER15a	ExonRegion	0	65.73	33.76	59.55	25.06	108.58	9.71	72.91
54	E15_Da	NovelBoundary	1	10.13	2.92	6.73	2.49	6.34	1.34	23.69
55	E15a_E16a	KnownJunction	0	69.15	35.55	49.30	18.99	159.87	5.79	61.77
56	I15	Intron	1	4.52	2.87	5.64	1.87	4.76	0.53	12.82
57	I15_AR1	ActiveIntronRegion	1	4.54	2.88	5.68	1.88	4.79	0.53	12.89
58	E16_Aa	NovelBoundary	1	0.73	4.10	7.06	0.00	4.38	1.13	23.92
59	ER16a	ExonRegion	1	77.38	38.66	61.63	22.70	146.94	5.06	80.55
60	E16a_E17a	KnownJunction	1	50.20	43.37	48.36	13.17	79.74	5.98	90.72
61	ER17a	ExonRegion	0	47.35	39.42	45.12	24.20	109.71	11.28	68.56
62	E17_Da	NovelBoundary	0	21.01	7.51	15.36	5.47	14.52	3.03	16.08
63	E17a_E19a	KnownJunction	1	16.51	25.77	18.80	25.84	64.41	15.38	51.68
64	ER18a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	E19_Aa	NovelBoundary	0	25.29	5.91	23.80	1.68	16.74	0.00	12.47
66	ER19a	ExonRegion	0	14.50	11.30	13.77	9.50	24.62	3.30	18.09
67	ER19b	ExonRegion	0	1.65	0.35	1.45	0.00	2.66	0.00	0.29