Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	BCL2L13	Gene	0	72.18	90.57	76.29	54.66	81.40	73.07	114.05
2	399781	Transcript	0	0.58	0.37	1.40	0.56	3.81	0.00	3.20
3	399782	Transcript	0	0.70	1.73	0.56	1.29	3.96	0.30	2.43
4	355028	Transcript	0	7.26	7.46	5.20	7.61	3.02	4.37	7.55
5	317582	Transcript	0	0	0	0	0	0	0	0
6	337612	Transcript	0	1.33	0.53	1.92	0.00	1.42	0.00	0.90
7	399777	Transcript	0	14.37	18.23	18.52	21.13	9.20	16.99	33.13
8	311319	Transcript	0	13.74	68.54	9.77	47.92	0.00	90.21	11.23
9	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	1.82	0.00	1.00
10	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	4.36	0.00	3.67
11	ER2a	ExonRegion	0	0.67	0.00	0.00	1.05	0.92	0.00	0.00
12	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER3a	ExonRegion	0	1.76	4.93	2.40	2.05	1.69	1.70	2.57
14	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER4a	ExonRegion	0	10.83	11.73	10.13	3.78	13.95	1.82	20.40
16	E4_Ab	KnownBoundary	1	36.83	32.16	26.10	8.94	42.56	4.42	60.02
17	ER4b	ExonRegion	1	27.89	26.63	25.09	13.00	24.28	7.82	39.18
18	E4a_E5a	KnownJunction	0	17.44	32.68	21.64	21.16	15.35	14.69	25.40
19	ER5a	ExonRegion	0	44.58	56.40	52.21	27.14	44.15	27.72	85.41
20	E5a_E6a	KnownJunction	0	46.65	66.41	57.18	32.16	79.58	50.01	88.73
21	ER6a	ExonRegion	0	68.20	64.40	94.90	34.49	88.58	44.75	143.82
22	E6a_E7a	KnownJunction	0	2.04	0.00	2.24	0.00	0.00	0.00	1.32
23	E6a_E8a	KnownJunction	0	92.46	74.40	98.90	31.80	98.09	29.05	157.07
24	E6a_E9a	KnownJunction	0	1.74	1.10	4.20	1.68	5.26	0.00	4.93
25	E6a_E10a	NovelJunction	0	4.62	4.12	5.59	2.36	6.64	8.63	6.38
26	E7_Aa	NovelBoundary	1	45.60	35.65	66.09	58.41	29.48	17.88	36.72
27	ER7a	ExonRegion	0	0.63	1.06	1.59	0.00	2.84	0.00	0.49
28	E7_Da	NovelBoundary	1	34.33	12.40	16.31	16.31	22.87	27.07	10.65
29	ER8a	ExonRegion	0	64.94	90.27	88.29	41.99	89.84	44.26	155.69
30	E8_Ab	KnownBoundary	0	66.34	77.42	88.32	50.63	96.18	48.78	147.63
31	ER8b	ExonRegion	0	80.41	90.29	102.66	48.58	103.27	48.35	190.74
32	E8a_E9a	KnownJunction	0	56.78	59.22	73.52	23.27	84.00	35.94	154.75
33	E8a_E10a	KnownJunction	0	14.37	18.23	18.52	21.13	9.20	16.99	33.13
34	E8a_E12a	KnownJunction	0	7.26	7.46	5.20	7.61	3.02	4.37	7.55
35	ER9a	ExonRegion	1	44.80	67.24	68.74	23.28	114.12	33.72	148.93
36	E9b_E10a	KnownJunction	1	47.40	56.90	82.69	19.86	108.42	18.44	137.62
37	ER9b	ExonRegion	0	46.87	61.96	79.93	22.45	111.76	26.97	154.48
38	ER10a	ExonRegion	0	66.72	79.08	97.05	53.24	130.11	36.47	200.31
39	E10_Da	KnownBoundary	0	3.59	12.01	3.52	8.21	23.35	5.90	16.88
40	E10a_E12a	KnownJunction	1	43.28	67.15	91.09	48.22	122.11	34.57	156.43
41	ER10b	ExonRegion	0	1.43	5.18	1.68	2.82	10.97	0.90	7.29
42	ER11a	ExonRegion	0	8.63	44.08	7.03	28.68	0.00	60.95	7.09
43	E11a_E12a	KnownJunction	0	18.86	93.00	12.50	67.16	0.00	119.47	15.36
44	ER12a	ExonRegion	0	62.60	138.26	83.61	82.25	100.17	95.35	156.45
45	E12_Da	KnownBoundary	0	73.67	143.15	73.62	61.66	119.90	75.90	138.38
46	ER12b	ExonRegion	0	130.29	132.78	120.55	83.49	121.82	125.18	153.77
47	E12_Db	KnownBoundary	0	45.56	10.35	68.50	4.55	34.86	17.42	57.51
48	ER12c	ExonRegion	0	32.14	6.76	43.91	6.62	33.44	14.63	39.11
49	IG9	Intergenic	0	16.54	16.64	11.93	6.72	16.29	11.26	17.69
50	IG9_AR1	ActiveIntergenicRegion	0	14.54	16.13	12.23	7.98	22.09	13.02	21.61
51	IG9_AR3	ActiveIntergenicRegion	0	18.19	17.36	12.03	6.09	12.99	10.42	15.64