Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C21orf66	Gene	0	135.88	78.32	138.96	68.63	195.14	118.26	52.55
2	342419	Transcript	0	36.67	13.30	43.32	9.36	35.93	16.53	14.53
3	290178	Transcript	0	41.07	16.96	33.13	15.39	22.23	18.09	9.18
4	331923	Transcript	0	151.54	88.97	157.98	66.54	266.18	147.05	56.39
5	ER1a	ExonRegion	0	12.01	21.75	11.15	13.01	12.32	22.76	4.87
6	E1a_E2a	KnownJunction	0	98.44	97.83	90.60	50.55	86.08	139.01	24.56
7	ER2a	ExonRegion	0	171.98	143.32	171.22	102.28	153.27	202.59	44.77
8	E2a_E3a	KnownJunction	0	197.89	164.51	212.35	130.28	156.85	223.59	55.95
9	ER3a	ExonRegion	0	221.91	157.64	231.56	117.86	189.58	203.52	64.03
10	E3a_E4a	KnownJunction	0	189.80	167.22	226.81	114.03	150.49	206.09	70.12
11	ER4a	ExonRegion	0	196.44	133.84	203.11	122.43	183.43	177.25	70.18
12	E4a_E5a	KnownJunction	0	246.86	126.34	184.07	111.34	190.26	154.05	52.58
13	ER5a	ExonRegion	0	174.15	146.48	191.21	134.31	196.54	183.58	69.08
14	E5a_E6a	KnownJunction	0	149.29	141.29	201.39	117.39	229.61	180.42	68.88
15	ER6a	ExonRegion	0	149.94	109.78	174.81	117.72	197.01	167.90	64.34
16	E6_Da	NovelBoundary	0	63.02	64.55	54.32	58.25	78.20	42.08	27.97
17	E6a_E7a	KnownJunction	0	80.10	33.63	113.57	65.10	141.59	75.07	41.42
18	I6	Intron	0	71.45	37.69	63.13	42.13	65.61	49.70	17.82
19	I6_AR1	ActiveIntronRegion	0	76.52	40.04	66.65	44.12	69.39	53.42	18.79
20	I6_SR1	SilentIntronRegion	0	48.78	27.26	47.67	33.52	48.92	32.94	13.52
21	E7_Aa	NovelBoundary	0	83.27	45.71	60.56	41.83	49.93	59.52	15.66
22	ER7a	ExonRegion	0	134.64	67.60	145.18	74.48	162.33	102.19	42.50
23	E7_Da	NovelBoundary	0	49.65	36.07	61.98	13.60	21.88	36.74	29.62
24	E7a_E8a	KnownJunction	0	0.00	0.00	1.25	1.19	2.97	0.00	0.00
25	E7a_E9a	KnownJunction	0	98.70	60.69	111.83	48.98	155.08	85.87	24.82
26	I7	Intron	0	43.57	15.44	44.53	11.58	35.18	14.26	18.62
27	I7_SR1	SilentIntronRegion	0	44.02	17.76	41.74	11.64	32.19	23.06	16.52
28	I7_AR1	ActiveIntronRegion	0	43.57	15.21	44.87	11.59	35.53	13.35	18.86
29	E8_Aa	NovelBoundary	0	86.65	11.74	76.29	13.46	45.05	21.17	30.01
30	ER8a	ExonRegion	0	73.35	26.59	85.39	17.52	68.89	33.06	29.06
31	E8_Da	NovelBoundary	0	62.29	34.68	67.70	31.89	126.95	43.76	37.00
32	E9_Aa	NovelBoundary	0	87.14	22.44	102.60	35.73	99.66	36.42	41.69
33	ER9a	ExonRegion	0	127.58	87.41	130.06	84.57	201.07	110.96	48.41
34	E9_Da	NovelBoundary	0	100.69	82.70	73.78	67.21	85.71	79.68	36.47
35	E9a_E10a	KnownJunction	0	50.30	22.78	83.76	28.36	127.80	33.87	27.14
36	I9_SR1	SilentIntronRegion	0	30.29	5.86	17.28	1.63	13.37	1.24	7.81
37	I9_AR3	ActiveIntronRegion	0	39.87	8.65	18.08	2.46	6.41	3.60	9.16
38	ER10a	ExonRegion	0	178.29	92.57	133.46	88.50	244.84	105.62	52.13
39	E10a_E11a	KnownJunction	0	184.01	89.80	137.64	94.93	253.72	119.85	54.14
40	E10a_E12a	NovelJunction	0	19.91	7.38	14.11	14.76	1.18	9.65	4.80
41	ER11a	ExonRegion	0	309.14	110.13	240.82	98.40	379.95	154.88	80.00
42	E11a_E12a	KnownJunction	1	534.21	130.15	363.80	141.58	448.42	239.24	94.82
43	ER12a	ExonRegion	0	334.35	106.50	285.36	115.57	367.76	199.11	85.87
44	E12a_E13a	KnownJunction	0	173.53	132.78	176.67	106.79	239.89	164.44	87.94
45	ER13a	ExonRegion	0	181.74	154.80	200.94	119.74	296.14	167.57	88.25
46	E13a_E14a	KnownJunction	0	168.95	140.89	192.46	140.47	326.13	195.96	90.47
47	ER14a	ExonRegion	0	235.20	130.74	239.69	129.41	296.92	179.01	87.41
48	E14a_E15a	KnownJunction	0	242.14	125.87	231.10	104.98	303.58	185.72	62.30
49	ER15a	ExonRegion	0	276.18	107.02	264.38	100.15	342.24	177.75	85.76
50	E15_Da	NovelBoundary	0	40.17	0.00	17.68	3.71	5.12	12.78	5.50
51	E15a_E16a	KnownJunction	0	297.80	87.83	257.29	88.61	365.73	154.18	82.05
52	E15a_E18a	NovelJunction	0	17.99	20.26	9.70	14.71	3.07	26.64	2.38
53	ER16a	ExonRegion	0	262.38	80.53	245.76	75.79	302.30	169.32	68.67
54	E16_Da	NovelBoundary	0	39.87	18.47	46.63	15.69	15.26	5.95	13.49
55	E16a_E17a	KnownJunction	1	47.62	14.08	41.29	17.04	19.41	23.24	7.32
56	E16a_E18a	KnownJunction	0	164.53	57.06	164.07	39.55	242.95	127.46	44.10
57	I16	Intron	0	36.99	8.70	28.14	9.94	17.76	5.21	5.55
58	I16_SR1	SilentIntronRegion	0	37.12	8.73	28.23	9.97	17.81	5.23	5.57
59	E17_Aa	NovelBoundary	1	37.09	24.46	43.77	26.96	36.56	6.70	18.54
60	ER17a	ExonRegion	0	34.53	19.83	24.98	13.75	25.04	12.94	11.04
61	E17_Da	NovelBoundary	0	43.78	38.01	34.96	20.13	23.51	29.48	21.74
62	E18_Aa	NovelBoundary	0	44.88	5.28	23.81	17.88	24.16	15.46	15.38
63	ER18a	ExonRegion	0	172.37	87.67	185.40	68.15	261.39	156.91	59.53
64	E18a_E19a	KnownJunction	0	166.17	116.65	166.62	76.32	274.12	145.87	47.65
65	ER19a	ExonRegion	0	140.26	110.18	154.54	84.65	243.95	156.33	65.38
66	E19a_E20a	KnownJunction	0	138.44	82.52	141.40	58.30	269.95	144.56	52.02
67	ER20a	ExonRegion	0	127.45	79.74	135.84	72.25	304.73	151.19	69.65