Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ATP9A	Gene	0	59.05	44.95	30.13	20.88	34.58	33.55	36.90
2	402822	Transcript	0	0	0	0	0	0	0	0
3	338821	Transcript	0	34.30	45.35	25.07	14.57	18.57	27.92	33.10
4	311637	Transcript	1	6.37	0.71	1.94	0.85	1.74	7.97	0.58
5	IG43_AR2	ActiveIntergenicRegion	0	0.45	0.34	0.34	0.45	633.24	3.04	0.00
6	IG43_SR2	SilentIntergenicRegion	0	2.76	1.21	0.68	3.74	350.19	7.36	0.00
7	IG43_AR1	ActiveIntergenicRegion	0	0.53	0.34	0.00	1.04	352.19	2.49	0.00
8	ER1a	ExonRegion	0	3.71	1.85	2.84	4.13	0.85	0.64	0.74
9	E1a_E2a	KnownJunction	0	15.99	12.24	7.59	10.59	8.85	11.87	6.58
10	ER1b	ExonRegion	0	10.85	8.22	5.68	9.69	5.08	9.01	4.00
11	ER2a	ExonRegion	0	18.99	38.45	10.83	16.55	6.55	23.45	15.32
12	E2a_E3a	KnownJunction	0	33.41	69.30	22.29	24.84	12.68	32.00	24.25
13	ER3a	ExonRegion	0	38.73	71.72	24.49	19.11	15.38	41.09	31.33
14	E3a_E4a	KnownJunction	0	27.29	76.92	19.44	24.49	11.20	28.54	36.72
15	ER4a	ExonRegion	0	34.58	62.14	20.40	25.05	13.18	33.50	31.79
16	E4_Da	NovelBoundary	1	0.80	17.55	0.00	1.63	1.18	0.00	0.00
17	E4a_E5a	KnownJunction	0	35.30	46.50	24.33	15.17	13.49	30.26	36.39
18	E4a_E10a	KnownJunction	0	0.00	3.97	0.00	0.00	0.00	4.50	0.00
19	ER5a	ExonRegion	0	37.86	54.61	28.98	18.15	15.09	39.81	35.25
20	E5a_E6a	KnownJunction	0	35.45	53.07	28.53	16.04	11.78	41.43	27.06
21	ER6a	ExonRegion	0	33.47	44.76	24.27	17.60	15.89	30.79	30.23
22	E6a_E7a	KnownJunction	0	26.82	26.27	13.34	11.68	17.34	16.35	32.80
23	E6a_E8a	NovelJunction	0	7.18	13.85	3.26	8.26	0.00	14.45	0.00
24	ER7a	ExonRegion	0	19.83	31.65	11.89	9.42	12.57	11.47	19.69
25	E7a_E8a	KnownJunction	0	22.80	26.27	17.85	8.75	3.39	15.01	16.78
26	ER8a	ExonRegion	0	41.06	48.76	33.30	12.32	21.28	29.89	36.35
27	E8a_E9a	KnownJunction	0	45.20	54.04	27.63	13.52	22.94	20.80	40.43
28	E8a_E10a	NovelJunction	0	0.00	4.62	0.57	2.79	0.00	9.35	0.00
29	ER9a	ExonRegion	0	36.02	59.85	28.08	16.33	32.35	29.59	43.00
30	E9a_E10a	KnownJunction	0	43.49	53.04	37.62	21.27	38.20	41.70	46.18
31	ER10a	ExonRegion	0	56.60	65.73	37.00	27.19	28.29	36.25	47.68
32	E10a_E11a	KnownJunction	0	60.28	56.96	30.05	36.06	26.05	43.95	35.66
33	ER11a	ExonRegion	0	74.90	67.80	33.70	31.62	34.58	49.41	53.25
34	E11a_E12a	KnownJunction	0	94.13	53.28	37.65	32.70	27.66	42.32	50.02
35	ER12a	ExonRegion	0	107.07	71.01	45.45	40.68	32.77	58.86	55.36
36	E12a_E13a	KnownJunction	0	108.58	59.90	38.79	45.73	32.25	49.77	43.48
37	ER13a	ExonRegion	0	97.32	61.32	46.35	41.07	32.80	46.53	52.21
38	E13a_E14a	KnownJunction	0	104.98	48.37	35.77	32.27	29.39	24.76	44.53
39	ER14a	ExonRegion	0	47.35	45.89	21.60	24.51	24.14	26.01	34.79
40	E14a_E15a	KnownJunction	0	35.63	33.39	21.40	23.49	18.07	34.89	42.32
41	ER15a	ExonRegion	0	45.33	47.48	25.37	26.19	29.76	46.85	38.38
42	E15a_E16a	KnownJunction	0	47.05	44.40	30.90	20.32	32.64	56.95	44.13
43	ER16a	ExonRegion	0	44.37	39.72	26.38	27.50	29.42	37.33	38.23
44	E16a_E17a	KnownJunction	0	46.72	39.64	24.46	16.90	23.33	30.10	26.63
45	ER17a	ExonRegion	0	47.45	38.63	20.13	15.53	33.05	19.63	31.36
46	E17a_E18a	KnownJunction	0	42.19	39.99	18.38	17.93	31.63	15.25	35.60
47	ER18a	ExonRegion	0	36.23	46.33	18.30	19.31	28.25	27.85	37.21
48	E18a_E19a	KnownJunction	1	31.11	48.97	10.25	24.52	35.92	38.81	42.05
49	ER19a	ExonRegion	0	53.57	59.50	24.15	28.37	33.60	35.15	43.39
50	E19a_E20a	KnownJunction	0	47.78	52.96	18.32	22.95	23.63	37.31	35.54
51	ER20a	ExonRegion	0	41.62	53.78	17.02	24.44	22.50	31.79	36.85
52	E20a_E21a	KnownJunction	0	39.66	39.14	15.81	19.59	17.84	21.23	25.09
53	ER21a	ExonRegion	0	28.11	34.72	13.58	19.91	15.24	19.80	21.55
54	E21a_E22a	KnownJunction	0	43.44	48.68	20.77	24.71	25.20	26.16	22.99
55	ER22a	ExonRegion	0	51.47	40.50	24.14	26.86	28.63	32.63	28.06
56	E22a_E23a	KnownJunction	0	50.30	33.60	27.46	27.52	33.66	35.05	35.21
57	ER23a	ExonRegion	0	50.92	54.80	26.78	26.87	26.19	39.26	40.31
58	E23a_E24a	KnownJunction	0	71.48	53.70	34.17	22.03	35.82	40.33	33.61
59	E24_Aa	NovelBoundary	1	40.27	4.60	8.54	1.68	2.19	3.00	0.73
60	ER24a	ExonRegion	0	62.56	54.99	37.66	23.96	38.85	37.21	45.06
61	E24_Da	NovelBoundary	1	22.01	9.09	5.45	1.68	1.06	4.18	1.78
62	E24a_E25a	KnownJunction	0	49.72	54.72	38.94	19.32	48.83	35.78	55.94
63	ER25a	ExonRegion	0	66.00	59.94	34.08	20.79	48.86	35.97	48.55
64	E25a_E26a	KnownJunction	0	58.55	46.53	21.64	19.99	43.78	19.62	43.94
65	E25a_E27a	NovelJunction	0	4.71	8.49	0.72	13.55	1.18	17.53	0.00
66	ER26a	ExonRegion	0	62.50	44.43	31.63	18.45	44.74	21.41	49.66
67	E26a_E27a	KnownJunction	0	58.75	36.83	31.36	13.41	47.30	16.21	51.51
68	ER27a	ExonRegion	0	61.28	61.48	24.52	32.10	41.99	36.15	51.61
69	E27a_E28a	KnownJunction	0	75.96	53.75	26.13	36.87	40.23	25.67	58.30
70	ER28a	ExonRegion	0	63.74	39.05	26.84	19.22	32.97	31.76	33.09
71	E28_Da	KnownBoundary	1	47.53	26.56	23.73	4.31	37.85	15.89	13.77
72	ER28b	ExonRegion	0	68.71	43.51	35.78	20.01	42.65	35.23	38.97
73	E28_Db	KnownBoundary	0	4.17	0.00	2.07	2.36	0.00	1.42	0.00
74	ER28c	ExonRegion	1	6.37	0.71	1.94	0.85	1.74	7.97	0.58
75	IG42_AR5	ActiveIntergenicRegion	0	5.28	99.05	16.98	118.36	0.00	159.15	0.00
76	IG42_SR3	SilentIntergenicRegion	0	8.96	8.93	33.32	23.32	0.02	26.82	0.00
77	IG42_AR4	ActiveIntergenicRegion	0	7.16	19.39	37.76	32.78	0.00	34.08	0.00
78	IG42_AR3	ActiveIntergenicRegion	0	8.64	22.20	40.41	41.14	0.00	36.10	0.00
79	IG42_SR2	SilentIntergenicRegion	0	10.69	10.96	32.69	25.67	0.01	39.19	0.06
80	IG42_AR2	ActiveIntergenicRegion	0	11.33	16.17	51.07	38.53	0.00	94.11	0.00
81	IG42_AR1	ActiveIntergenicRegion	0	4.53	6.50	11.92	14.28	0.00	26.42	0.00
82	IG42_SR1	SilentIntergenicRegion	0	4.97	9.47	23.30	30.18	0.00	63.35	0.04