Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RBCK1	Gene	0	62.20	113.09	63.97	61.57	67.12	53.99	967.27
2	356286	Transcript	0	0.00	0.00	0.00	0.00	0.50	0.00	0.93
3	353660	Transcript	0	0	0	0	0	0	0	0
4	400245	Transcript	0	101.86	119.40	71.09	71.52	64.09	81.55	1453.31
5	400243	Transcript	1	0.67	1.38	4.18	0.86	4.04	0.25	59.34
6	400244	Transcript	0	0	0	0	0	0	0	0
7	382214	Transcript	0	0	0	0	0	0	0	0
8	382181	Transcript	0	0	0	0	0	0	0	0
9	400247	Transcript	1	12.45	34.86	7.31	21.54	9.20	17.63	67.50
10	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.50	0.00	0.93
11	E1_Ad	KnownBoundary	0	7.21	2.71	5.93	5.58	5.39	0.00	17.61
12	ER1b	ExonRegion	0	0.30	1.59	0.89	0.58	2.43	0.00	3.53
13	ER1c	ExonRegion	0	0.77	2.43	1.77	2.40	3.74	0.00	14.53
14	ER1d	ExonRegion	0	4.81	5.99	3.06	4.41	2.87	1.32	42.91
15	E1_Ae	KnownBoundary	0	8.55	7.59	7.07	1.68	5.09	4.61	87.56
16	E1_Af	KnownBoundary	1	59.93	57.09	42.81	39.96	94.47	39.48	246.97
17	ER1e	ExonRegion	1	37.24	33.69	26.44	25.35	50.24	28.81	193.02
18	ER1f	ExonRegion	0	64.23	141.08	59.85	68.62	65.32	60.22	972.89
19	E1a_E2a	KnownJunction	0	154.85	197.38	134.81	91.11	153.46	85.79	2289.72
20	E1a_E3a	KnownJunction	1	12.45	34.86	7.31	21.54	9.20	17.63	67.50
21	E1a_E5a	KnownJunction	1	3.82	11.14	5.32	8.61	6.71	0.00	56.91
22	E2_Aa	NovelBoundary	0	11.25	45.24	12.20	22.24	12.56	15.76	262.19
23	ER2a	ExonRegion	0	123.02	225.85	113.60	116.41	135.30	119.14	2182.10
24	E2a_E3a	KnownJunction	0	101.86	119.40	71.09	71.52	64.09	81.55	1453.31
25	E2a_E4a	KnownJunction	0	0.85	0.00	3.43	1.16	1.15	0.00	33.26
26	E2a_E5a	KnownJunction	0	52.16	124.13	80.06	50.55	100.88	44.41	1420.01
27	ER3a	ExonRegion	0	76.32	121.85	58.40	67.53	73.35	64.14	1116.10
28	ER4a	ExonRegion	0	1.16	1.27	3.12	1.42	7.73	0.76	61.52
29	E4a_E5a	KnownJunction	1	0.00	2.86	5.98	0.00	3.23	0.00	83.25
30	ER5a	ExonRegion	0	93.42	174.29	110.71	69.68	101.11	55.51	1747.36
31	E5a_E6a	KnownJunction	0	90.08	171.71	86.55	75.10	105.67	59.68	1556.48
32	ER6a	ExonRegion	0	49.91	143.91	66.20	55.29	81.76	38.41	1076.78
33	E6a_E7a	KnownJunction	0	32.51	87.54	51.00	44.97	44.12	21.41	588.00
34	ER7a	ExonRegion	0	26.06	60.47	26.94	26.22	31.90	16.57	327.41
35	E7a_E8a	KnownJunction	0	44.18	71.17	45.93	22.40	36.10	23.42	518.05
36	ER8a	ExonRegion	0	36.63	80.15	39.48	22.55	34.21	17.75	486.57
37	E8_Da	KnownBoundary	0	39.49	93.05	44.40	29.91	38.91	21.98	543.38
38	ER8b	ExonRegion	0	34.58	77.18	31.62	30.59	46.96	30.61	476.72
39	E8_Db	NovelBoundary	1	30.51	53.75	21.83	6.01	19.50	9.94	41.96
40	E8b_E9a	KnownJunction	0	34.58	45.16	23.58	19.32	10.95	27.34	662.68
41	E8b_E10a	KnownJunction	1	0.78	1.63	8.78	5.53	32.53	2.65	47.35
42	I8	Intron	0	14.64	33.03	9.00	8.50	10.86	8.56	29.09
43	I8_AR1	ActiveIntronRegion	1	18.31	46.35	12.81	11.57	16.55	12.30	39.70
44	I8_AR2	ActiveIntronRegion	1	32.08	37.81	10.08	7.95	12.96	15.02	39.55
45	I8_SR1	SilentIntronRegion	1	24.50	30.91	9.74	9.69	9.97	7.57	33.12
46	ER9a	ExonRegion	0	32.20	71.18	33.87	29.62	24.02	32.04	697.45
47	E9a_E10a	KnownJunction	0	39.57	100.86	45.54	46.14	32.80	51.83	917.10
48	ER10a	ExonRegion	0	54.88	144.80	69.15	87.98	89.21	65.17	1154.07
49	E10_Da	KnownBoundary	0	79.99	169.82	86.98	112.62	95.28	65.23	1406.82
50	ER10b	ExonRegion	0	87.27	167.45	99.20	107.65	97.31	80.04	1468.12
51	E10b_E11a	KnownJunction	0	109.15	163.36	109.20	96.34	123.63	90.85	1528.13
52	ER11a	ExonRegion	0	115.45	191.80	132.20	110.92	146.75	96.18	1877.94
53	E11a_E12a	KnownJunction	0	116.28	143.89	116.40	107.69	103.25	87.88	1646.98
54	ER12a	ExonRegion	0	79.14	135.67	93.96	87.75	97.86	67.62	1343.22
55	E12_Da	NovelBoundary	0	30.56	15.66	33.09	1.63	21.90	4.13	13.93
56	E12a_E13a	KnownJunction	0	73.17	87.62	96.67	62.77	111.05	52.61	1237.55
57	ER13a	ExonRegion	0	66.64	99.57	84.01	70.24	78.93	63.68	927.16
58	E13a_E14a	KnownJunction	0	61.25	109.79	58.42	64.21	31.37	76.59	598.14
59	ER14a	ExonRegion	0	84.66	135.46	85.89	75.51	83.63	77.72	1021.50
60	E14_Da	KnownBoundary	0	127.51	169.24	130.54	83.55	107.15	91.79	1576.07
61	ER14b	ExonRegion	0	76.69	111.57	80.50	77.96	66.86	67.88	1010.15
62	ER14c	ExonRegion	0	1.92	4.86	4.40	2.49	2.43	1.84	29.68
63	IG13	Intergenic	0	2.31	4.46	1.67	1.86	1.60	1.68	25.56
64	IG13_SR1	SilentIntergenicRegion	0	4.39	4.24	4.63	2.89	3.89	2.74	70.60
65	IG13_AR1	ActiveIntergenicRegion	0	5.25	6.41	3.15	3.46	4.13	2.08	65.16
66	IG13_AR4	ActiveIntergenicRegion	0	1.79	5.57	0.96	0.00	1.05	0.00	8.15