Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C20orf27	Gene	0	6.89	7.10	14.48	11.06	100.48	4.37	58.43
2	399683	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	379772	Transcript	0	0.21	0.56	0.00	0.15	0.06	0.61	0.05
4	399672	Transcript	0	0.00	0.00	0.53	0.42	0.23	0.00	0.05
5	379765	Transcript	0	0.00	1.58	0.27	0.00	1.36	0.00	0.37
6	405186	Transcript	0	0.63	1.45	1.19	1.75	12.22	0.59	6.48
7	217195	Transcript	0	0	0	0	0	0	0	0
8	399673	Transcript	0	0	0	0	0	0	0	0
9	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER2a	ExonRegion	0	0.21	0.56	0.00	0.15	0.06	0.61	0.05
11	E2_Ab	KnownBoundary	0	0.00	1.42	0.00	0.00	2.88	0.00	0.57
12	ER2b	ExonRegion	0	1.54	1.56	1.09	1.66	23.67	0.19	13.04
13	E2_Ac	KnownBoundary	0	0.93	0.00	0.83	0.00	14.18	0.00	8.37
14	E2_Ad	KnownBoundary	0	0.00	0.00	0.79	0.00	2.35	0.00	2.57
15	E2_Ae	KnownBoundary	0	1.69	2.31	7.99	5.88	98.18	3.59	51.48
16	ER2c	ExonRegion	0	2.85	4.34	5.42	5.88	92.55	2.98	44.52
17	ER2d	ExonRegion	0	3.29	7.29	6.77	8.91	132.12	4.38	57.73
18	ER2e	ExonRegion	0	4.05	11.72	10.49	14.91	144.68	6.87	64.48
19	E2_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E2a_E3a	KnownJunction	0	5.19	4.41	8.85	11.73	40.73	7.13	22.56
21	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER2f	ExonRegion	0	0.00	0.00	0.44	0.83	0.45	0.00	0.11
23	E2b_E3a	KnownJunction	0	0.00	0.00	0.62	0.00	0.00	0.00	0.00
24	ER3a	ExonRegion	0	4.12	7.74	5.33	13.00	48.52	8.27	47.42
25	E3_Ab	KnownBoundary	1	5.51	12.72	7.52	10.76	65.47	6.11	65.92
26	E3_Da	KnownBoundary	0	0.00	1.63	0.00	2.93	1.13	0.00	5.06
27	E3a_E4a	KnownJunction	0	12.12	16.47	32.76	20.32	190.79	19.38	191.90
28	ER3b	ExonRegion	0	7.56	14.85	17.88	21.54	153.69	14.30	137.02
29	ER3c	ExonRegion	0	0.00	0.62	0.79	4.49	6.96	0.00	4.34
30	E3b_E4a	KnownJunction	0	0.00	0.00	1.26	5.34	13.09	0.00	2.81
31	ER4a	ExonRegion	0	17.27	25.49	48.87	45.12	377.31	23.85	234.65
32	E4a_E5a	KnownJunction	0	27.76	38.70	78.59	56.32	437.50	28.14	294.55
33	ER5a	ExonRegion	0	35.02	36.96	73.73	44.73	499.49	16.66	315.00
34	E5_Da	KnownBoundary	0	1.03	0.00	0.00	2.41	20.45	0.00	11.79
35	E5a_E5b	KnownJunction	0	44.96	34.63	94.90	43.62	571.09	15.87	302.84
36	ER5b	ExonRegion	0	0.70	0.87	1.44	1.84	17.55	0.50	7.30
37	E5_Ab	KnownBoundary	0	0.98	2.31	0.00	0.00	4.52	0.00	0.63
38	ER5c	ExonRegion	0	39.19	28.19	83.41	42.51	510.43	11.19	301.03
39	E5_Db	KnownBoundary	0	0.78	2.89	1.85	1.08	13.53	0.00	5.29
40	E5b_E5c	KnownJunction	0	26.24	13.53	38.64	41.29	374.31	6.99	222.61
41	ER5d	ExonRegion	0	0.35	2.14	1.98	2.15	10.97	0.00	4.62
42	E5_Dc	KnownBoundary	0	0.00	1.26	0.57	3.06	0.00	0.00	4.57
43	E5c_E5c	KnownJunction	0	0.00	3.15	0.53	0.00	2.72	0.00	0.75
44	ER5e	ExonRegion	0	0.55	2.02	0.93	1.66	6.90	0.68	5.66
45	E5_Ac	KnownBoundary	0	1.03	0.00	0.00	1.68	8.74	1.42	1.32
46	ER5f	ExonRegion	0	17.03	15.31	33.02	25.43	215.02	9.73	118.43
47	ER5g	ExonRegion	0	1.54	1.21	5.42	1.25	28.34	3.68	7.42
48	ER5h	ExonRegion	0	0.77	0.00	0.68	1.25	13.77	2.45	2.70