Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RP5-1187M17.10	Gene	0	17.54	44.56	26.88	116.18	75.19	58.90	33.77
2	360342	Transcript	0	0.76	5.56	1.87	13.30	3.78	8.99	2.84
3	329152	Transcript	0	4.27	33.52	9.61	87.76	35.02	36.77	14.10
4	337576	Transcript	0	0	0	0	0	0	0	0
5	IG9	Intergenic	0	7.21	4.19	13.18	8.08	11.70	2.45	7.94
6	IG9_AR8	ActiveIntergenicRegion	0	2.88	0.00	6.10	3.79	15.72	0.46	2.70
7	IG9_SR6	SilentIntergenicRegion	0	17.25	6.00	26.54	23.58	24.23	3.45	15.84
8	IG9_AR7	ActiveIntergenicRegion	0	16.20	12.46	29.13	19.80	33.31	7.63	13.58
9	IG9_AR6	ActiveIntergenicRegion	0	17.51	15.53	29.38	21.36	30.01	6.80	19.70
10	IG9_SR5	SilentIntergenicRegion	0	6.27	1.60	9.71	2.47	7.77	1.29	7.28
11	IG9_AR5	ActiveIntergenicRegion	0	10.26	3.23	15.89	8.39	13.47	2.59	14.44
12	IG9_AR3	ActiveIntergenicRegion	0	4.93	1.31	11.78	5.47	5.42	0.00	3.19
13	IG9_SR3	SilentIntergenicRegion	0	4.48	0.33	15.16	7.37	6.31	1.23	3.08
14	IG9_AR2	ActiveIntergenicRegion	0	4.16	3.04	17.74	8.80	8.25	0.67	4.19
15	IG9_SR2	SilentIntergenicRegion	0	0.94	1.54	6.71	7.60	7.61	0.59	1.99
16	ER1a	ExonRegion	0	1.17	4.75	2.39	12.02	2.07	4.81	0.81
17	E1a_E2b	KnownJunction	0	0.85	9.30	1.57	15.66	1.01	8.84	3.15
18	I1_AR1	ActiveIntronRegion	0	10.65	11.11	10.28	10.22	19.41	3.85	5.84
19	I1_SR2	SilentIntronRegion	0	10.25	9.11	7.99	8.53	16.59	4.71	4.45
20	I1_AR2	ActiveIntronRegion	0	6.09	10.70	7.43	6.38	12.02	3.56	2.45
21	ER2a	ExonRegion	0	2.07	4.63	0.50	1.29	3.68	0.32	1.10
22	E2_Ab	KnownBoundary	0	0.92	1.18	2.14	2.57	7.63	0.00	1.58
23	ER2b	ExonRegion	1	1.67	22.15	6.27	43.87	17.71	22.08	11.28
24	E2_Da	KnownBoundary	0	0.00	1.63	4.02	2.11	8.74	3.32	3.44
25	E2a_E2c	KnownJunction	0	1.00	8.17	3.23	24.84	11.71	21.71	7.38
26	ER2c	ExonRegion	0	2.36	2.46	3.63	3.40	12.05	1.68	2.24
27	E2_Ac	KnownBoundary	0	0.62	1.13	0.00	3.25	6.45	4.07	1.52
28	ER2d	ExonRegion	0	8.79	40.92	15.95	106.87	54.02	46.88	31.95
29	E2b_E3a	KnownJunction	0	15.17	61.53	31.76	138.22	80.15	88.55	48.21
30	ER3a	ExonRegion	0	12.16	43.36	15.58	105.31	59.99	51.99	28.25
31	E3_Da	KnownBoundary	1	8.38	39.51	7.37	91.65	37.51	45.72	23.56
32	E3a_E3b	KnownJunction	0	0.00	0.00	0.00	1.63	2.19	0.00	0.00
33	ER3b	ExonRegion	0	4.27	33.52	9.61	87.76	35.02	36.77	14.10
34	E3_Ab	KnownBoundary	0	7.63	43.72	12.78	121.50	36.22	55.93	22.20
35	ER3c	ExonRegion	0	6.38	37.48	11.50	107.31	54.98	38.94	21.96
36	E3b_E4a	KnownJunction	0	11.52	53.20	21.12	121.80	94.10	40.01	27.60
37	ER4a	ExonRegion	0	30.98	69.16	47.76	186.09	125.47	97.44	55.36
38	ER4b	ExonRegion	0	0.00	0.00	0.27	0.69	0.32	0.61	0.00