Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DENND4B	Gene	0	63.31	70.02	88.16	77.07	107.02	55.15	48.07
2	368646	Transcript	0	5.67	12.44	7.47	6.31	6.45	11.60	5.39
3	361217	Transcript	0	0.00	4.15	0.60	1.68	3.34	0.00	2.01
4	ER1a	ExonRegion	0	0.00	0.19	0.00	0.00	0.00	0.00	0.00
5	ER1b	ExonRegion	0	1.60	8.88	1.67	8.06	1.64	9.59	1.83
6	E1a_E2a	KnownJunction	0	0.00	4.15	0.60	1.68	3.34	0.00	2.01
7	E1b_E2a	KnownJunction	0	10.87	20.12	15.29	8.94	9.64	18.25	9.42
8	ER1c	ExonRegion	0	6.15	17.01	7.11	9.98	9.72	16.55	6.75
9	ER2a	ExonRegion	0	27.24	60.02	37.11	57.78	29.86	46.07	22.85
10	E2a_E3a	KnownJunction	0	28.54	68.17	46.72	59.00	33.13	58.24	22.67
11	ER3a	ExonRegion	0	26.00	61.57	48.32	63.92	47.15	56.80	29.35
12	E3a_E4a	KnownJunction	0	26.64	36.78	56.02	65.10	49.31	34.73	28.92
13	ER4a	ExonRegion	0	16.47	24.56	27.47	37.68	39.36	19.83	12.84
14	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.88	1.31	0.54
15	I4	Intron	0	7.60	18.41	13.94	19.36	23.69	10.84	8.79
16	I4_AR1	ActiveIntronRegion	0	7.64	18.49	14.00	19.44	23.78	10.89	8.83
17	E5_Aa	NovelBoundary	0	43.09	73.11	65.61	65.89	60.65	37.25	55.39
18	ER5a	ExonRegion	0	47.81	83.88	52.85	74.42	66.62	50.04	54.38
19	E5a_E6a	KnownJunction	0	69.73	93.76	82.43	87.78	95.95	50.84	73.25
20	ER6a	ExonRegion	0	64.40	93.76	78.21	86.58	94.43	56.34	71.78
21	E6a_E7a	KnownJunction	0	61.70	104.14	86.28	100.35	116.65	69.52	88.73
22	ER7a	ExonRegion	0	47.19	77.96	83.88	92.66	130.80	60.24	76.13
23	E7a_E8a	KnownJunction	0	40.29	58.24	70.27	77.48	101.39	44.89	59.30
24	ER8a	ExonRegion	0	61.85	81.65	94.90	106.55	113.62	47.93	68.58
25	E8a_E9a	KnownJunction	0	94.01	89.38	123.05	128.60	100.93	69.73	88.75
26	ER9a	ExonRegion	0	80.05	90.02	124.52	123.51	129.92	68.94	81.05
27	E9a_E10a	KnownJunction	0	103.16	101.43	131.91	108.23	190.69	74.69	90.23
28	ER10a	ExonRegion	0	70.08	73.48	95.73	94.29	109.53	52.34	54.46
29	E10a_E11a	KnownJunction	0	43.58	49.21	81.97	75.20	76.95	31.44	36.42
30	E10a_E12a	NovelJunction	1	0.80	0.00	3.36	5.99	4.13	11.28	6.54
31	I10	Intron	0	10.44	2.89	21.71	2.97	19.10	0.27	7.88
32	I10_AR1	ActiveIntronRegion	0	10.49	2.91	21.82	2.99	19.20	0.27	7.93
33	ER11a	ExonRegion	0	51.20	63.61	94.55	75.26	92.06	35.85	44.15
34	E11a_E12a	KnownJunction	0	70.23	62.68	103.68	77.75	165.87	39.72	32.62
35	ER12a	ExonRegion	0	89.02	95.08	154.80	96.67	136.34	58.37	66.39
36	E12a_E13a	KnownJunction	0	92.48	88.48	145.28	82.28	129.51	59.01	66.30
37	ER13a	ExonRegion	0	97.84	81.87	163.76	87.87	145.31	54.72	75.45
38	E13a_E14a	KnownJunction	0	74.12	53.54	133.51	82.52	133.75	31.33	54.29
39	ER14a	ExonRegion	0	64.27	64.51	98.74	78.36	107.67	36.08	55.54
40	E14a_E15a	KnownJunction	0	40.61	72.19	74.22	88.72	131.84	38.91	53.08
41	ER15a	ExonRegion	0	58.35	83.88	84.70	91.33	128.75	47.92	71.51
42	E15a_E16a	KnownJunction	0	73.10	87.54	109.56	79.27	143.62	53.60	86.72
43	ER16a	ExonRegion	0	55.09	94.72	86.23	87.90	141.06	53.03	81.29
44	E16a_E17a	KnownJunction	0	50.39	78.71	91.77	83.36	92.65	49.77	77.12
45	ER17a	ExonRegion	0	41.53	71.45	70.94	78.29	90.67	36.61	42.49
46	E17a_E18a	KnownJunction	0	69.18	65.23	124.32	95.28	122.78	41.49	51.61
47	ER18a	ExonRegion	0	52.49	62.85	86.90	88.35	72.02	37.07	37.87
48	E18a_E19a	KnownJunction	0	53.21	50.26	93.64	74.26	82.34	42.56	35.17
49	ER19a	ExonRegion	0	45.50	53.91	63.78	63.78	63.11	41.44	29.87
50	E19a_E20a	KnownJunction	0	68.30	46.37	85.56	61.25	50.30	57.78	28.51
51	ER20a	ExonRegion	0	76.33	76.46	111.64	98.39	118.09	74.29	56.45
52	E20a_E21a	KnownJunction	0	77.52	78.45	97.00	89.27	108.12	82.36	43.45
53	ER21a	ExonRegion	0	71.31	84.77	109.63	99.49	139.49	81.96	59.99
54	E21a_E22a	KnownJunction	0	71.18	52.57	92.44	68.87	149.84	63.03	43.35
55	ER22a	ExonRegion	0	66.40	64.64	86.19	72.76	130.76	66.96	48.38
56	E22a_E23a	KnownJunction	0	50.55	61.84	71.87	62.09	89.88	59.25	30.86
57	ER23a	ExonRegion	0	69.99	80.00	109.73	82.44	148.04	81.55	53.92
58	E23a_E24a	KnownJunction	0	41.74	81.78	75.20	74.45	104.91	59.66	45.49
59	E24_Aa	NovelBoundary	1	17.61	0.00	34.07	0.00	11.55	1.10	1.43
60	ER24a	ExonRegion	0	58.21	92.41	80.42	73.55	158.08	79.77	47.37
61	E24a_E25a	KnownJunction	0	51.94	68.38	56.72	44.08	85.32	45.64	27.44
62	ER25a	ExonRegion	0	50.06	69.73	71.81	59.51	104.25	50.66	39.96
63	E25a_E26a	KnownJunction	0	45.85	60.50	85.58	83.33	109.39	48.94	49.63
64	ER26a	ExonRegion	0	59.58	70.99	88.74	93.20	161.04	53.55	55.43
65	E26a_E27a	KnownJunction	0	79.78	85.12	92.98	84.12	180.50	61.10	51.87
66	ER27a	ExonRegion	0	124.75	83.71	141.57	92.95	185.08	83.28	59.59