Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PMF1	Gene	0	85.88	116.43	80.92	78.74	295.03	80.69	58.79
2	368279	Transcript	0	0	0	0	0	0	0	0
3	368277	Transcript	0	1.54	3.04	2.71	3.74	6.07	4.90	0.67
4	368273	Transcript	0	3.27	6.91	2.25	5.46	5.29	8.45	4.77
5	320139	Transcript	0	0.00	0.00	0.00	0.00	1.15	0.00	0.00
6	368276	Transcript	0	3.44	15.50	8.55	12.79	14.41	16.96	7.37
7	368272	Transcript	0	4.60	13.33	6.35	9.55	7.98	7.56	3.28
8	ER1a	ExonRegion	0	2.25	2.59	1.81	0.91	26.62	0.33	2.02
9	ER1b	ExonRegion	0	111.56	112.91	101.59	93.01	439.85	79.95	74.97
10	E1a_E2a	KnownJunction	0	0.72	2.86	0.00	4.33	2.21	5.28	4.64
11	E1a_E3a	KnownJunction	0	27.76	145.04	40.09	104.33	60.91	96.02	51.54
12	I1	Intron	0	10.36	19.70	4.65	22.69	6.02	41.26	3.78
13	I1_SR1	SilentIntronRegion	1	10.37	19.73	4.66	22.71	6.02	41.31	3.78
14	I1_AR2	ActiveIntronRegion	0	26.79	21.18	15.79	11.02	13.28	12.09	8.60
15	ER2a	ExonRegion	0	5.79	14.87	3.76	8.06	8.34	14.62	3.93
16	E2a_E3a	NovelJunction	0	2.69	8.77	3.78	4.61	2.90	5.41	2.14
17	E2a_E4a	KnownJunction	0	3.29	2.99	3.00	3.98	5.30	5.44	5.75
18	I2_SR1	SilentIntronRegion	0	19.97	7.51	7.29	7.32	6.63	4.84	1.77
19	ER3a	ExonRegion	0	209.62	168.95	199.83	134.01	596.36	135.11	135.85
20	E3a_E4a	KnownJunction	0	120.43	156.92	155.70	104.49	1058.52	146.09	102.38
21	ER4a	ExonRegion	0	92.06	187.89	115.38	115.65	492.52	127.98	97.64
22	E4a_E5a	KnownJunction	0	91.89	153.77	100.87	106.31	320.78	99.37	84.73
23	E4a_E5b	KnownJunction	0	0.00	17.97	0.89	14.30	2.28	8.58	0.59
24	E4a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	1.15	0.00	0.00
25	ER5a	ExonRegion	0	120.74	186.83	157.05	124.03	405.75	122.46	99.09
26	E5_Ab	KnownBoundary	0	134.59	196.33	171.65	129.55	461.77	128.00	102.76
27	ER5b	ExonRegion	0	100.65	190.65	108.33	117.69	409.17	131.29	81.82
28	E5a_E6a	KnownJunction	0	125.14	161.15	100.48	109.69	345.68	105.70	78.46
29	E5a_E8a	KnownJunction	0	3.44	15.50	8.55	12.79	14.41	16.96	7.37
30	I5_AR3	ActiveIntronRegion	0	10.76	25.38	9.71	12.33	12.15	9.67	8.02
31	I5_AR4	ActiveIntronRegion	1	11.38	24.68	8.42	11.22	13.01	6.67	7.21
32	E6_Aa	NovelBoundary	1	16.67	35.94	3.45	5.42	17.22	10.85	6.16
33	ER6a	ExonRegion	0	148.73	194.00	122.60	123.41	476.51	127.24	89.78
34	ER6b	ExonRegion	0	5.84	7.78	6.23	4.99	18.79	7.60	3.24
35	ER6c	ExonRegion	0	1.54	3.04	2.71	3.74	6.07	4.90	0.67
36	ER7a	ExonRegion	0	5.34	7.35	4.21	6.65	3.36	2.74	3.31
37	E7a_E8a	KnownJunction	0	0.00	2.55	3.38	1.68	5.58	0.00	0.00
38	ER8a	ExonRegion	0	4.91	22.33	13.39	26.54	27.10	23.23	7.70
39	E8a_E9a	KnownJunction	0	6.31	21.65	9.79	32.51	32.18	23.77	7.72
40	ER9a	ExonRegion	0	6.84	18.29	11.78	24.17	36.25	27.27	7.17
41	E9a_E10a	KnownJunction	0	3.62	22.93	15.06	22.73	20.31	35.54	5.06
42	ER10a	ExonRegion	0	6.70	26.51	12.06	26.77	18.29	34.78	8.82
43	E10_Da	KnownBoundary	0	9.73	33.52	14.93	33.24	19.06	30.47	11.72
44	ER10b	ExonRegion	0	8.48	30.08	11.47	20.31	14.98	19.93	6.54