Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CRTC2	Gene	0	201.69	525.26	188.70	505.19	69.36	440.52	105.11
2	368633	Transcript	0	69.06	305.71	90.39	257.05	30.90	275.97	59.97
3	303569	Transcript	0	52.72	299.75	91.08	269.26	26.08	274.73	54.88
4	368630	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	IG7	Intergenic	0	15.44	9.75	6.74	5.27	0.60	2.10	1.42
6	IG7_SR1	SilentIntergenicRegion	0	15.76	9.91	6.88	5.40	0.60	2.09	1.47
7	ER1a	ExonRegion	0	2.21	17.44	2.63	10.55	0.37	6.05	1.38
8	E1_Ab	KnownBoundary	0	21.81	94.94	21.94	47.71	2.81	42.64	6.21
9	ER1b	ExonRegion	0	15.67	74.96	11.05	39.94	4.29	36.29	1.74
10	E1_Ac	KnownBoundary	0	29.56	86.51	18.75	41.86	12.66	40.39	5.98
11	ER1c	ExonRegion	0	60.29	242.55	58.67	117.95	16.40	133.70	27.25
12	E1_Da	KnownBoundary	0	103.49	318.75	112.00	168.97	14.73	219.84	48.68
13	E1a_E11b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER1d	ExonRegion	0	120.93	346.17	123.42	188.31	56.73	232.17	54.72
15	E1b_E2a	KnownJunction	0	164.68	379.07	157.67	220.36	83.04	254.01	71.77
16	I1	Intron	0	55.19	36.24	23.12	14.45	4.99	8.90	6.70
17	I1_AR1	ActiveIntronRegion	1	51.13	35.26	19.62	14.29	4.13	9.10	5.29
18	I1_SR2	SilentIntronRegion	1	71.30	31.43	25.73	8.74	4.83	7.17	7.11
19	I1_AR2	ActiveIntronRegion	1	58.87	39.74	31.75	20.02	4.00	12.77	5.80
20	I1_SR3	SilentIntronRegion	0	52.90	40.89	23.62	17.08	5.88	9.32	8.03
21	I1_AR3	ActiveIntronRegion	1	54.90	35.62	15.22	8.62	11.36	7.25	8.12
22	E2_Aa	NovelBoundary	1	140.53	57.06	38.93	31.07	8.16	22.83	11.79
23	ER2a	ExonRegion	0	193.67	656.09	226.15	551.51	66.77	589.38	103.37
24	E2_Da	NovelBoundary	1	110.57	56.19	39.43	28.74	9.06	18.60	9.89
25	E2a_E3a	KnownJunction	0	86.00	614.59	176.09	607.06	46.36	555.29	80.57
26	E3_Aa	NovelBoundary	1	75.04	43.98	24.72	15.04	9.36	15.12	10.25
27	ER3a	ExonRegion	0	222.24	782.70	262.08	754.18	85.98	724.56	116.70
28	E3a_E4a	KnownJunction	0	55.49	312.39	107.20	298.27	27.32	295.68	62.31
29	E3b_E4b	KnownJunction	0	111.89	348.31	130.78	295.65	46.31	324.84	93.80
30	ER3b	ExonRegion	0	154.46	857.08	227.26	721.99	75.32	772.99	144.70
31	E4_Ab	NovelBoundary	1	75.94	10.88	78.19	8.78	3.97	2.63	0.00
32	ER4a	ExonRegion	0	49.95	287.11	74.96	240.25	24.84	253.78	47.45
33	ER4b	ExonRegion	0	166.75	874.99	233.43	654.97	67.40	673.68	138.68
34	E4a_E5a	KnownJunction	0	172.64	829.55	230.10	560.33	66.81	504.26	114.28
35	E4a_E6a	NovelJunction	1	5.96	36.60	13.24	134.26	0.00	155.39	2.52
36	ER5a	ExonRegion	0	238.78	830.35	280.21	612.35	90.28	492.16	148.65
37	E5a_E6a	KnownJunction	0	276.80	801.49	347.65	663.16	112.59	533.34	174.50
38	ER6a	ExonRegion	0	296.66	833.02	354.06	754.69	139.75	677.39	188.04
39	E6a_E7a	KnownJunction	0	255.86	591.61	271.94	712.85	171.31	510.83	133.65
40	E7a_E8a	KnownJunction	0	595.91	524.01	470.83	640.30	148.71	420.38	206.86
41	ER7a	ExonRegion	0	526.99	641.77	445.09	762.97	179.30	521.13	205.71
42	I7	Intron	0	86.29	75.62	48.20	38.04	24.77	30.26	14.21
43	I7_SR1	SilentIntronRegion	0	92.24	82.05	52.17	40.95	26.61	33.17	15.53
44	E8_Aa	NovelBoundary	0	182.69	230.14	139.84	235.04	33.75	234.47	54.43
45	ER8a	ExonRegion	0	548.34	984.48	499.85	1068.86	154.13	778.45	269.52
46	E8a_E9a	KnownJunction	0	334.88	1140.39	340.22	1171.66	155.81	881.15	238.02
47	ER9a	ExonRegion	0	330.41	1023.03	320.71	1026.52	112.65	773.78	194.23
48	E9a_E10a	KnownJunction	0	262.60	774.19	241.35	814.98	110.33	600.69	140.20
49	E9a_E11a	NovelJunction	0	6.86	18.76	2.95	10.08	5.83	7.72	8.04
50	ER10a	ExonRegion	0	265.15	767.15	218.10	786.07	106.62	615.33	154.91
51	E10_Da	NovelBoundary	0	23.35	21.57	17.56	29.72	28.45	9.19	8.48
52	E10a_E11a	KnownJunction	0	185.88	645.94	154.28	602.34	76.88	528.01	134.56
53	E10a_E12a	NovelJunction	0	7.83	37.59	8.67	39.82	0.85	50.30	6.00
54	I10	Intron	0	31.69	30.17	21.09	22.89	28.94	10.08	10.04
55	I10_SR1	SilentIntronRegion	0	31.86	30.33	21.20	23.01	29.09	10.13	10.10
56	E11_Aa	NovelBoundary	0	52.96	24.01	29.86	24.06	44.84	11.77	14.66
57	ER11a	ExonRegion	0	179.36	588.43	162.73	521.65	70.30	459.77	130.32
58	E11_Ab	KnownBoundary	0	188.05	530.60	168.92	500.89	53.94	417.78	122.23
59	ER11b	ExonRegion	0	116.24	386.81	103.41	356.27	51.68	291.33	84.90
60	E11a_E12a	KnownJunction	0	127.06	346.28	103.73	398.73	42.09	297.16	84.58
61	E12_Aa	NovelBoundary	1	57.80	14.45	36.41	6.53	4.29	2.71	3.07
62	ER12a	ExonRegion	0	146.36	426.90	157.84	460.80	54.10	399.13	92.20
63	E12a_E13a	KnownJunction	0	124.44	476.09	152.63	475.69	23.70	462.11	77.36
64	ER13a	ExonRegion	0	209.08	472.44	191.22	486.82	59.31	442.13	82.25
65	E13a_E14a	KnownJunction	0	224.78	458.04	180.32	548.89	133.75	469.67	115.63
66	E14_Aa	NovelBoundary	1	100.19	6.96	72.21	0.00	4.52	1.66	0.86
67	ER14a	ExonRegion	0	235.83	442.30	187.26	457.65	63.84	414.76	92.96
68	ER14b	ExonRegion	0	7.68	0.00	0.90	0.00	1.62	0.00	0.00