Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DENND2C	Gene	0	41.32	116.45	33.17	59.74	19.69	31.55	143.13
2	369539	Transcript	0	0	0	0	0	0	0	0
3	393277	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	369540	Transcript	0	2.82	7.07	3.49	12.08	2.03	2.25	22.34
5	393276	Transcript	0	0.00	2.43	0.00	1.25	0.00	1.23	0.00
6	393274	Transcript	0	10.86	16.50	5.11	10.13	1.77	3.01	35.51
7	IG4_AR1	ActiveIntergenicRegion	0	1.50	21.70	5.20	4.92	0.00	2.81	6.41
8	ER1a	ExonRegion	0	2.72	1.51	2.74	4.06	1.88	1.19	3.15
9	E1_Ab	KnownBoundary	0	10.10	1.21	15.55	13.09	11.30	3.94	13.74
10	ER1b	ExonRegion	0	20.59	39.51	29.31	34.63	15.54	11.58	63.94
11	E1a_E2a	KnownJunction	1	9.46	12.87	3.18	12.38	3.30	2.84	52.42
12	E1a_E3a	NovelJunction	0	3.27	2.86	0.88	2.82	0.00	2.25	13.67
13	E1a_E4a	KnownJunction	0	25.35	57.19	31.84	33.46	10.44	18.14	71.83
14	ER2a	ExonRegion	1	12.25	18.21	2.87	7.80	0.54	1.63	31.49
15	E2a_E3a	KnownJunction	1	7.61	11.69	4.93	5.93	0.00	0.00	11.32
16	ER3a	ExonRegion	1	14.33	26.63	7.52	16.30	1.67	2.96	38.48
17	E3a_E4a	KnownJunction	0	10.66	13.08	7.06	8.24	3.32	7.61	43.84
18	E4_Aa	NovelBoundary	1	13.30	0.00	7.54	2.36	0.00	0.00	1.39
19	ER4a	ExonRegion	0	54.60	162.56	51.76	79.15	13.38	37.71	157.34
20	E4a_E5a	KnownJunction	0	101.06	167.45	64.85	71.66	27.39	52.85	185.38
21	ER5a	ExonRegion	0	90.13	204.82	72.62	90.35	25.00	55.91	212.72
22	E5a_E6a	KnownJunction	0	85.12	163.93	51.82	86.75	17.66	39.34	150.55
23	ER6a	ExonRegion	0	93.84	154.76	56.36	90.22	27.79	39.28	180.92
24	E6a_E7a	KnownJunction	0	77.41	152.64	45.37	92.92	27.76	34.25	152.09
25	E6a_E8a	KnownJunction	0	0.00	3.10	1.44	1.41	0.00	1.50	0.83
26	ER7a	ExonRegion	0	67.13	167.52	42.32	71.66	22.28	45.38	157.69
27	E7a_E8a	KnownJunction	0	50.19	124.21	32.05	55.37	21.16	37.39	151.40
28	ER8a	ExonRegion	0	39.93	154.98	32.51	67.37	18.86	36.43	173.73
29	E8a_E9a	KnownJunction	0	28.42	144.18	19.79	71.93	14.66	32.94	172.88
30	ER9a	ExonRegion	0	25.97	131.20	26.37	68.17	11.84	29.10	179.62
31	E9_Da	NovelBoundary	0	19.13	8.17	6.73	15.01	7.42	3.08	7.74
32	E9a_E10a	KnownJunction	0	21.88	102.91	27.03	53.64	13.14	21.20	145.41
33	I9	Intron	0	15.80	27.00	12.05	10.86	2.64	3.87	31.33
34	I9_SR1	SilentIntronRegion	0	15.82	27.03	12.06	10.88	2.64	3.87	31.36
35	E10_Aa	NovelBoundary	0	10.48	33.68	9.97	12.92	1.04	4.18	32.09
36	ER10a	ExonRegion	0	30.11	161.27	33.96	78.93	15.35	42.77	204.59
37	E10a_E11a	KnownJunction	1	25.14	144.62	37.78	69.71	14.02	45.96	210.31
38	ER11a	ExonRegion	1	27.09	118.40	40.90	64.34	16.93	38.08	197.36
39	E11a_E12a	KnownJunction	0	26.62	122.32	29.79	62.17	20.84	41.89	172.18
40	ER12a	ExonRegion	1	19.30	121.59	23.80	69.58	18.19	38.69	202.69
41	E12a_E13a	KnownJunction	1	18.96	118.93	26.61	69.24	15.68	27.76	224.09
42	ER13a	ExonRegion	0	29.78	135.21	29.59	74.51	17.85	33.43	206.59
43	E13a_E14a	KnownJunction	0	30.61	133.01	24.98	71.11	11.99	40.74	169.64
44	ER14a	ExonRegion	1	30.08	160.81	35.67	93.57	20.03	53.30	219.41
45	E14_Da	KnownBoundary	1	36.57	184.85	33.76	106.50	22.25	47.52	254.37
46	E14a_E16b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER14b	ExonRegion	0	37.47	188.16	29.50	104.56	21.60	42.06	244.92
48	E14b_E15a	KnownJunction	0	37.60	194.22	26.79	102.46	19.71	44.54	241.10
49	E15_Aa	NovelBoundary	1	5.61	4.07	11.74	3.01	0.00	0.00	1.65
50	ER15a	ExonRegion	1	31.83	179.29	31.99	82.37	23.92	50.24	250.65
51	E15a_E16a	KnownJunction	1	27.25	181.77	18.98	56.62	24.97	32.88	249.28
52	ER16a	ExonRegion	1	32.09	204.61	26.64	71.48	21.02	29.75	268.62
53	E16a_E17a	KnownJunction	0	34.93	139.05	22.37	65.26	26.33	24.71	184.20
54	ER16b	ExonRegion	1	37.85	185.66	25.68	80.40	25.32	23.67	248.40
55	ER17a	ExonRegion	1	45.10	184.83	31.51	72.26	28.61	23.38	267.49
56	E17a_E18a	KnownJunction	1	41.02	170.27	33.37	59.52	21.37	18.36	237.90
57	ER18a	ExonRegion	1	67.51	194.68	38.41	96.49	30.87	17.19	225.74
58	E18a_E19a	KnownJunction	1	75.09	213.72	43.30	103.73	31.81	18.01	223.77
59	ER19a	ExonRegion	0	65.48	164.88	37.00	75.82	27.69	25.93	192.31
60	E19a_E20a	KnownJunction	0	41.17	123.50	29.66	56.40	21.76	30.18	166.90
61	ER20a	ExonRegion	0	31.06	97.45	20.87	44.72	16.33	22.62	124.56
62	E20_Da	NovelBoundary	1	12.70	1.13	6.64	4.50	2.93	0.00	3.07
63	E20a_E21a	KnownJunction	1	17.11	75.24	13.72	19.10	16.46	7.16	100.06
64	ER20b	ExonRegion	0	3.46	2.13	0.00	0.00	0.81	0.92	1.35
65	I20_SR1	SilentIntronRegion	0	12.58	9.00	8.71	5.45	0.57	2.66	8.13
66	ER21a	ExonRegion	0	21.36	88.44	15.31	25.94	17.65	16.18	112.39
67	ER21b	ExonRegion	0	27.66	85.85	17.21	25.96	20.46	19.39	111.26
68	ER21c	ExonRegion	0	43.99	89.15	31.96	60.91	20.84	26.16	167.55
69	E21_Db	KnownBoundary	0	9.63	27.82	13.25	32.67	2.93	15.09	49.86
70	E21b_E21c	KnownJunction	0	2.82	7.07	3.49	12.08	2.03	2.25	22.34
71	ER21d	ExonRegion	0	35.48	26.21	24.77	15.94	27.31	16.45	27.17
72	E21_Ac	KnownBoundary	0	6193.69	5720.55	4612.13	4048.47	3576.33	5607.29	2965.44
73	ER21e	ExonRegion	0	29.15	159.64	28.24	80.38	21.96	57.31	163.92
74	ER21f	ExonRegion	0	0.77	3.64	0.00	2.49	0.00	2.45	2.70
75	ER21g	ExonRegion	0	0.00	2.43	0.00	1.25	0.00	1.23	0.00
76	IG3	Intergenic	0	4.06	10.83	2.63	11.12	0.48	4.20	10.48
77	IG3_SR2	SilentIntergenicRegion	0	5.39	14.71	3.60	14.39	0.40	4.48	13.71
78	IG3_AR2	ActiveIntergenicRegion	0	5.76	8.71	4.52	10.60	0.81	6.13	12.03
79	IG3_SR1	SilentIntergenicRegion	0	2.98	7.61	1.83	8.41	0.58	4.01	7.90