Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NEXN	Gene	0	1.51	1.24	128.85	188.24	22.69	23.34	14.51
2	401035	Transcript	0	0.00	0.00	0.71	0.64	0.04	0.04	0.02
3	330010	Transcript	0	0.68	0.00	141.72	226.81	27.69	13.91	18.11
4	342754	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	294624	Transcript	0	0	0	0	0	0	0	0
6	334785	Transcript	0	0	0	0	0	0	0	0
7	IG1	Intergenic	0	10.10	2.20	13.46	15.64	5.91	4.59	13.76
8	IG1_SR1	SilentIntergenicRegion	0	24.33	9.65	25.76	8.53	15.80	5.54	37.48
9	IG1_AR1	ActiveIntergenicRegion	0	40.62	8.20	42.68	12.92	17.58	14.65	52.13
10	IG1_SR3	SilentIntergenicRegion	0	0.62	0.21	4.62	17.38	2.28	1.59	1.72
11	ER1a	ExonRegion	0	0.00	0.75	23.37	89.65	5.49	6.48	4.49
12	E1a_E2a	KnownJunction	1	0.00	0.00	25.23	137.84	15.03	10.37	9.66
13	ER2a	ExonRegion	0	0.84	0.32	91.30	226.98	21.17	30.87	15.24
14	E2a_E3a	KnownJunction	1	0.00	1.37	25.08	89.62	2.35	23.82	0.00
15	E2a_E4a	KnownJunction	0	0.68	0.00	141.72	226.81	27.69	13.91	18.11
16	E2a_E5a	NovelJunction	0	0.00	0.00	0.00	10.32	0.00	0.00	0.00
17	ER3a	ExonRegion	1	0.76	0.83	31.11	118.76	3.51	22.44	0.80
18	E3a_E4a	KnownJunction	1	3.52	0.00	37.56	147.13	7.84	24.95	0.54
19	ER4a	ExonRegion	0	3.13	0.20	191.91	381.27	33.06	41.65	27.15
20	E4a_E5a	KnownJunction	0	1.42	1.16	195.13	376.62	43.82	44.19	26.00
21	ER5a	ExonRegion	0	4.45	2.91	306.42	550.44	58.03	73.32	39.59
22	E5a_E6a	KnownJunction	1	3.64	2.10	197.42	155.75	57.70	39.26	27.73
23	E5a_E7a	KnownJunction	1	0.93	0.00	144.05	382.12	0.92	51.75	6.46
24	E5a_E9a	NovelJunction	0	0.00	0.00	22.45	20.05	1.18	0.00	1.78
25	E5a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER6a	ExonRegion	0	2.23	1.74	200.18	169.56	53.06	34.09	35.19
27	E6a_E7a	KnownJunction	0	0.77	1.50	138.66	126.87	65.15	26.99	27.70
28	ER7a	ExonRegion	0	2.02	1.41	300.29	363.12	52.78	61.81	26.34
29	E7a_E8a	KnownJunction	0	1.67	1.47	281.01	293.07	41.22	32.67	20.78
30	ER8a	ExonRegion	0	2.58	1.25	256.47	346.26	37.40	43.98	23.21
31	E8_Da	NovelBoundary	0	0.62	0.97	105.81	162.38	10.14	22.81	9.54
32	E8a_E9a	KnownJunction	0	1.84	2.42	241.34	332.38	54.75	54.94	25.85
33	ER9a	ExonRegion	0	1.99	1.60	160.72	237.76	23.56	32.71	18.15
34	E9_Da	KnownBoundary	0	0.00	1.63	120.31	168.94	17.91	23.80	15.71
35	E9a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER9b	ExonRegion	0	0.05	2.08	135.86	187.38	22.44	25.00	17.40
37	E9b_E11a	KnownJunction	0	0.00	1.63	150.67	199.93	34.21	27.17	19.13
38	ER10a	ExonRegion	0	0.00	0.00	1.42	1.28	0.07	0.07	0.04
39	E10_Da	NovelBoundary	0	10633.76	6655.21	7603.66	5868.01	6495.76	6962.77	4851.67
40	ER11a	ExonRegion	0	0.68	1.12	157.63	164.44	21.74	17.18	10.81
41	E11a_E12a	KnownJunction	0	0.00	0.00	104.41	119.77	17.20	11.93	5.78
42	E11a_E13a	NovelJunction	1	0.00	0.00	19.70	27.99	0.00	0.00	0.89
43	ER12a	ExonRegion	0	0.45	0.94	139.07	158.95	19.70	13.84	11.77
44	E12a_E13a	KnownJunction	0	0.00	2.63	126.78	187.80	15.28	16.24	15.11
45	ER13a	ExonRegion	0	0.63	2.80	153.98	267.85	26.94	21.12	22.11
46	E13a_E14a	KnownJunction	0	0.00	3.05	104.80	263.00	17.98	26.61	15.48
47	ER14a	ExonRegion	0	1.73	1.10	89.28	117.72	17.64	13.71	11.21