Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ODF2L	Gene	0	80.60	23.30	35.33	11.98	39.07	14.63	18.18
2	370567	Transcript	0	0	0	0	0	0	0	0
3	370566	Transcript	1	29.82	13.71	25.26	9.64	12.86	18.68	6.09
4	317336	Transcript	1	23.92	10.93	11.01	4.39	14.41	9.54	1.69
5	394731	Transcript	0	0	0	0	0	0	0	0
6	370568	Transcript	0	0	0	0	0	0	0	0
7	394733	Transcript	0	0	0	0	0	0	0	0
8	294678	Transcript	0	0	0	0	0	0	0	0
9	359242	Transcript	0	12.24	2.87	3.57	1.61	6.06	1.44	3.71
10	ER1a	ExonRegion	0	20.15	6.25	4.00	1.92	5.95	1.67	7.08
11	E1_Ab	KnownBoundary	0	23.02	4.83	5.65	0.00	10.07	1.66	5.90
12	E1_Ac	KnownBoundary	1	61.80	31.00	17.68	14.74	23.21	12.57	22.33
13	ER1b	ExonRegion	0	62.07	34.76	17.84	11.78	21.78	10.35	20.46
14	ER1c	ExonRegion	0	60.46	54.23	15.46	20.35	12.78	23.07	15.53
15	E1a_E2a	KnownJunction	0	76.54	39.75	27.06	19.45	18.05	30.20	14.70
16	E1a_E2b	KnownJunction	0	1.65	1.63	0.00	0.00	0.00	0.00	2.78
17	E2_Ab	NovelBoundary	0	27.34	21.02	14.38	9.24	13.99	12.22	5.99
18	ER2a	ExonRegion	0	76.36	44.34	25.99	21.20	26.83	30.96	11.64
19	ER2b	ExonRegion	0	101.57	70.25	50.56	27.14	34.15	44.50	25.95
20	E2_Da	NovelBoundary	1	48.57	36.96	23.21	20.07	6.99	14.34	3.51
21	E2a_E3a	KnownJunction	1	69.01	34.68	37.16	9.62	21.60	23.42	35.57
22	E2a_E4a	KnownJunction	0	37.10	8.88	21.07	2.49	5.86	1.66	6.13
23	I2	Intron	0	61.67	12.54	23.17	10.22	9.32	6.40	8.01
24	I2_AR1	ActiveIntronRegion	0	38.94	8.55	19.33	4.62	5.31	4.12	3.41
25	I2_SR2	SilentIntronRegion	0	57.60	6.18	15.03	4.82	11.45	3.48	6.88
26	I2_AR3	ActiveIntronRegion	0	87.29	18.45	31.77	17.63	11.67	9.80	12.39
27	I2_SR3	SilentIntronRegion	0	17.79	4.56	4.71	0.19	5.22	1.41	3.98
28	I2_AR4	ActiveIntronRegion	0	30.28	5.71	8.63	1.12	9.90	1.95	4.10
29	E3_Aa	NovelBoundary	0	52.56	10.93	20.13	6.66	12.89	14.82	12.68
30	ER3a	ExonRegion	0	124.13	45.76	50.89	21.85	50.57	19.71	43.27
31	E3_Da	NovelBoundary	0	20.98	9.12	10.25	3.33	3.00	5.44	1.40
32	E3a_E4a	KnownJunction	0	146.10	36.07	59.77	24.25	66.92	12.78	56.44
33	I3	Intron	0	24.00	5.77	10.12	5.04	1.57	1.85	1.25
34	I3_AR1	ActiveIntronRegion	0	26.29	7.33	10.23	4.87	1.84	2.47	1.21
35	I3_SR1	SilentIntronRegion	0	19.10	2.31	9.98	5.46	0.96	0.46	1.34
36	E4_Aa	NovelBoundary	1	20.63	3.26	12.49	1.68	4.56	7.08	1.19
37	ER4a	ExonRegion	0	197.41	52.07	90.55	25.07	53.98	24.17	59.71
38	E4_Da	NovelBoundary	0	19.33	15.76	6.73	6.34	0.97	19.78	3.10
39	E4a_E5a	KnownJunction	0	160.49	57.25	59.91	22.54	43.64	18.36	43.32
40	I4_AR1	ActiveIntronRegion	0	16.56	10.61	10.02	2.02	1.81	5.48	1.67
41	I4_SR2	SilentIntronRegion	0	19.08	6.07	9.37	3.12	0.00	1.23	1.35
42	I4_AR7	ActiveIntronRegion	0	18.65	6.52	10.41	3.17	0.81	1.23	1.35
43	ER5a	ExonRegion	0	199.03	67.13	93.17	30.44	63.90	28.51	61.98
44	E5a_E6a	KnownJunction	0	247.18	81.15	120.04	40.53	96.57	32.03	81.75
45	ER6a	ExonRegion	0	254.36	66.11	112.86	33.43	76.47	29.17	73.77
46	E6a_E7a	KnownJunction	0	189.83	40.75	69.52	21.81	47.83	30.90	56.35
47	E6a_E8a	KnownJunction	1	23.92	10.93	11.01	4.39	14.41	9.54	1.69
48	ER7a	ExonRegion	0	166.90	41.63	72.24	15.78	45.30	22.69	55.27
49	E7_Da	NovelBoundary	0	30.16	4.52	14.72	1.03	4.89	0.00	4.03
50	E7a_E8a	KnownJunction	0	180.12	31.11	59.18	11.35	55.81	22.75	66.20
51	I7	Intron	0	17.76	2.65	7.47	1.19	2.42	1.27	1.61
52	I7_AR1	ActiveIntronRegion	0	20.47	2.04	9.53	1.79	4.17	1.18	2.42
53	ER8a	ExonRegion	0	150.91	55.54	60.52	19.01	51.65	20.49	50.98
54	E8a_E9a	KnownJunction	0	113.26	38.38	50.68	17.39	30.41	15.68	40.51
55	ER9a	ExonRegion	0	133.75	37.36	65.76	15.08	45.37	14.34	42.64
56	E9a_E10a	KnownJunction	0	179.63	37.67	71.43	18.64	53.16	14.50	42.81
57	ER10a	ExonRegion	0	139.41	33.84	62.78	14.50	35.72	18.23	32.61
58	E10a_E11a	KnownJunction	0	4.46	1.44	1.26	0.00	0.00	0.00	1.53
59	E10a_E12a	KnownJunction	0	150.19	26.01	57.45	13.19	52.91	20.10	20.87
60	E11_Aa	NovelBoundary	0	13.03	0.00	6.90	2.95	6.82	1.66	7.60
61	ER11a	ExonRegion	0	11.76	2.67	4.25	1.93	6.71	0.52	2.94
62	E11a_E12a	KnownJunction	0	3.55	1.29	1.34	1.30	3.18	1.66	1.68
63	I11_SR1	SilentIntronRegion	0	18.08	2.45	6.19	0.95	6.57	1.31	4.21
64	I11_AR3	ActiveIntronRegion	0	20.73	1.09	4.88	0.02	5.04	0.24	1.62
65	ER12a	ExonRegion	0	248.72	46.21	106.90	17.92	66.09	26.11	38.42
66	E12a_E13a	KnownJunction	1	301.34	43.48	129.59	22.40	75.77	27.95	30.00
67	E13_Aa	NovelBoundary	1	124.36	0.00	52.83	0.00	0.00	0.00	0.00
68	ER13a	ExonRegion	0	167.70	32.47	77.96	17.56	59.13	24.36	23.93
69	E13a_E14a	KnownJunction	0	48.20	7.96	18.01	10.00	37.90	5.84	12.94
70	E13a_E16a	KnownJunction	1	29.82	13.71	25.26	9.64	12.86	18.68	6.09
71	I13	Intron	0	38.56	6.71	12.54	2.96	7.02	2.67	5.06
72	I13_AR1	ActiveIntronRegion	0	27.61	2.77	9.96	1.49	5.45	2.58	2.72
73	I13_SR1	SilentIntronRegion	0	33.58	3.66	6.45	5.07	4.00	2.98	7.23
74	I13_AR2	ActiveIntronRegion	1	39.45	4.45	7.23	3.74	6.61	3.68	8.10
75	I13_SR2	SilentIntronRegion	0	41.84	8.85	6.83	7.18	5.48	4.01	6.91
76	I13_AR3	ActiveIntronRegion	1	29.14	9.38	7.93	1.38	6.53	2.58	5.63
77	I13_AR6	ActiveIntronRegion	0	59.56	10.52	21.88	4.83	10.01	3.91	6.17
78	I13_SR4	SilentIntronRegion	0	62.15	5.70	18.46	3.42	12.68	0.67	7.90
79	I13_AR7	ActiveIntronRegion	0	24.28	4.11	12.21	0.21	7.14	0.77	5.98
80	ER14a	ExonRegion	0	68.46	26.45	23.09	9.87	52.74	7.97	29.96
81	E14_Da	NovelBoundary	1	40.02	14.29	11.18	11.03	16.74	2.76	15.31
82	E14a_E15a	KnownJunction	0	4.57	6.09	0.89	0.00	0.97	0.00	1.32
83	E14a_E16a	KnownJunction	1	22.82	14.82	10.15	4.12	40.50	6.35	30.76
84	I14	Intron	0	52.49	4.94	13.87	3.72	9.71	4.08	8.18
85	I14_AR1	ActiveIntronRegion	0	58.18	5.51	14.36	4.47	10.66	5.33	9.23
86	I14_SR1	SilentIntronRegion	0	34.32	3.11	12.44	1.29	6.66	0.00	4.80
87	E15_Aa	NovelBoundary	1	53.49	11.45	15.33	0.00	10.05	3.00	8.14
88	ER15a	ExonRegion	0	15.03	5.08	5.33	0.03	8.53	1.23	3.20
89	E15_Da	NovelBoundary	0	26.40	5.81	9.05	1.68	3.34	0.00	3.48
90	E15a_E16a	KnownJunction	0	30.64	9.80	14.20	1.14	12.86	2.76	5.56
91	I15	Intron	0	21.68	3.39	8.45	0.82	4.90	1.40	4.51
92	I15_AR1	ActiveIntronRegion	0	22.71	3.44	8.98	0.87	5.10	1.49	4.74
93	E16_Aa	NovelBoundary	0	15.71	10.19	8.85	1.68	6.25	1.13	2.67
94	ER16a	ExonRegion	0	131.43	50.59	73.51	17.57	72.60	28.31	51.36
95	E16a_E17a	KnownJunction	0	139.16	55.51	65.63	15.58	75.27	39.21	47.62
96	ER17a	ExonRegion	0	182.79	60.30	86.28	23.07	67.91	41.11	50.57
97	E17a_E18a	KnownJunction	0	178.85	59.87	74.87	22.32	64.48	46.82	47.18
98	ER18a	ExonRegion	0	231.10	53.96	91.08	28.20	69.95	38.68	47.95
99	E18a_E19a	KnownJunction	1	202.38	39.43	67.66	11.30	33.22	27.42	11.24
100	E18a_E19b	KnownJunction	0	56.36	16.50	14.53	4.31	20.96	12.84	17.84
101	ER19a	ExonRegion	0	118.91	29.58	55.63	19.81	78.25	24.21	17.70
102	E19_Da	KnownBoundary	0	14.14	1.02	5.33	0.00	5.42	0.00	1.53
103	ER19b	ExonRegion	0	28.16	5.43	7.13	4.09	13.50	3.41	4.87
104	E19_Ab	KnownBoundary	0	7.98	6.62	4.04	2.93	2.03	1.34	4.90
105	ER19c	ExonRegion	1	41.05	14.00	13.74	2.80	22.46	9.60	20.79
106	E19_Db	KnownBoundary	0	25.87	4.36	8.56	2.76	13.21	4.66	15.19
107	ER19d	ExonRegion	0	6.91	1.56	3.58	0.73	4.68	0.90	3.47
108	ER20a	ExonRegion	0	0.13	0.07	0.04	0.07	0.00	0.00	0.00