Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 CACHD1 Gene 0 80.09 15.97 228.79 96.85 288.67 54.92 23.51 2 371073 Transcript 0 0.00 1.82 0.34 1.25 0.00 0.00 0.00 3 290039 Transcript 0 0 0 0 0 0 0 0 4 335761 Transcript 0 1.50 0.64 4.94 2.91 4.36 1.75 0.39 5 ER1a ExonRegion 0 0.00 1.82 0.34 1.25 0.00 0.00 0.00 6 ER1b ExonRegion 0 17.26 10.47 51.42 44.58 38.59 21.52 3.60 7 E1a_E3b KnownJunction 0 29.32 14.03 103.09 72.71 87.37 34.71 5.93 8 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER3a ExonRegion 0 4.50 1.91 14.81 8.73 13.07 5.25 1.16 11 ER3b ExonRegion 0 36.00 18.24 111.83 68.34 100.32 37.73 10.38 12 E3a_E4a KnownJunction 0 33.76 18.02 94.43 62.28 103.07 41.59 10.52 13 I3_SR1 SilentIntronRegion 0 18.26 3.12 37.95 6.13 4.11 1.90 0.65 14 ER4a ExonRegion 0 53.02 13.93 172.41 91.20 166.75 46.04 15.10 15 E4a_E5a KnownJunction 0 94.73 22.02 232.08 74.61 248.65 33.50 16.80 16 ER5a ExonRegion 0 93.15 19.09 275.88 108.05 241.54 45.02 27.66 17 E5a_E6a KnownJunction 0 82.06 16.76 266.35 113.57 260.08 65.42 19.26 18 ER6a ExonRegion 0 109.67 15.75 342.90 117.29 277.73 49.16 23.83 19 E6a_E7a KnownJunction 1 45.75 12.58 180.78 84.33 262.57 18.36 20.47 20 E6a_E8a NovelJunction 1 15.61 3.26 51.36 33.84 9.80 8.47 0.82 21 ER7a ExonRegion 0 55.03 14.55 188.50 66.88 254.61 28.60 22.95 22 E7a_E8a KnownJunction 0 69.63 15.55 176.15 73.63 311.86 20.50 27.65 23 ER8a ExonRegion 0 90.17 18.67 278.09 114.59 273.18 45.00 27.23 24 E8a_E9a KnownJunction 0 93.81 20.10 280.35 127.71 349.43 47.97 24.08 25 ER9a ExonRegion 0 87.52 22.18 285.87 130.32 279.25 45.83 24.01 26 E9a_E10a KnownJunction 0 54.03 14.21 226.99 114.32 200.38 39.69 17.86 27 E9a_E11a NovelJunction 0 4.91 0.00 19.10 15.44 5.28 6.03 3.18 28 E10_Aa NovelBoundary 1 4.96 9.27 8.91 1.68 3.25 0.00 0.00 29 ER10a ExonRegion 0 69.22 17.56 215.05 112.34 289.98 47.22 22.87 30 E10a_E11a KnownJunction 0 110.04 13.87 288.40 160.19 249.41 74.05 40.69 31 ER11a ExonRegion 0 101.19 22.50 295.67 141.34 279.37 65.58 32.25 32 E11a_E12a KnownJunction 0 106.82 23.83 356.71 153.61 359.69 73.99 39.41 33 ER12a ExonRegion 0 137.30 22.86 400.40 133.25 446.50 69.24 39.02 34 E12a_E13a KnownJunction 0 150.51 18.81 422.33 112.92 466.08 61.59 28.42 35 ER13a ExonRegion 0 134.01 19.30 389.16 123.24 457.47 71.68 32.35 36 E13a_E14a KnownJunction 0 147.74 20.70 422.70 120.45 430.81 71.64 39.77 37 ER14a ExonRegion 0 132.96 25.31 361.75 127.14 430.21 61.77 31.00 38 E14a_E15a KnownJunction 0 132.37 15.50 327.95 112.59 576.60 38.40 27.86 39 ER15a ExonRegion 0 95.29 18.81 265.06 122.21 363.49 61.74 26.89 40 E15a_E16a KnownJunction 0 82.98 16.47 193.76 85.47 231.10 22.99 23.29 41 ER16a ExonRegion 0 104.06 21.36 276.67 107.60 343.05 54.71 28.82 42 E16a_E17a KnownJunction 0 103.24 15.03 287.65 112.21 389.13 54.75 25.01 43 ER17a ExonRegion 0 109.12 16.11 306.77 96.09 462.21 60.08 35.27 44 E17a_E18a KnownJunction 0 104.23 17.84 289.69 91.70 547.16 58.61 37.05 45 ER18a ExonRegion 0 86.55 13.00 273.68 105.48 328.84 60.22 33.66 46 E18a_E19a KnownJunction 0 91.34 14.58 283.41 97.85 324.75 69.68 37.20 47 ER19a ExonRegion 0 95.13 16.86 264.63 112.24 392.67 56.87 33.30 48 E19a_E20a KnownJunction 0 112.21 10.09 283.60 121.48 546.17 51.32 36.77 49 ER20a ExonRegion 0 96.00 15.46 278.23 92.47 347.56 45.68 27.10 50 E20a_E21a KnownJunction 0 64.42 17.73 207.05 76.34 290.86 32.08 16.81 51 ER21a ExonRegion 0 84.90 21.66 214.48 89.17 298.41 42.13 20.78 52 E21a_E22a KnownJunction 0 64.11 23.59 185.20 69.62 268.04 45.99 22.11 53 ER22a ExonRegion 0 66.12 22.44 196.16 98.40 298.34 38.75 22.69 54 E22a_E23a KnownJunction 0 41.14 11.95 146.32 86.10 268.17 34.44 21.61 55 ER23a ExonRegion 0 60.05 13.39 160.23 82.09 265.81 50.99 19.73 56 E23a_E24a KnownJunction 0 54.26 14.34 160.50 80.87 256.02 43.17 16.83 57 ER24a ExonRegion 0 73.53 16.55 219.03 95.64 296.36 57.87 25.04 58 E24a_E25a KnownJunction 0 75.32 19.05 244.48 119.36 356.93 76.30 29.61 59 ER25a ExonRegion 0 64.04 16.57 181.53 107.23 239.13 63.59 23.68 60 E25a_E26a KnownJunction 0 45.28 19.62 142.30 120.47 233.57 59.50 21.28 61 ER26a ExonRegion 0 52.19 21.71 143.82 130.07 338.04 81.64 28.41 62 E26a_E27a KnownJunction 0 84.94 19.41 225.69 129.90 495.94 71.23 38.01 63 ER27a ExonRegion 0 67.77 20.13 180.04 120.12 336.95 81.96 29.52 64 E27a_E28a KnownJunction 0 53.16 17.60 146.38 132.69 348.12 83.45 23.03 65 ER28a ExonRegion 0 73.04 11.69 197.85 80.78 271.43 60.78 19.87