Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MKNK1	Gene	0	86.52	45.27	59.20	56.98	52.25	51.86	145.12
2	371949	Transcript	0	12.03	6.31	10.16	8.85	5.04	3.25	9.02
3	371944	Transcript	0	0	0	0	0	0	0	0
4	371946	Transcript	0	10.78	3.27	9.86	2.94	5.60	2.89	4.43
5	341183	Transcript	0	35.32	32.97	28.01	61.20	8.44	41.33	80.90
6	371945	Transcript	0	0	0	0	0	0	0	0
7	342571	Transcript	0	2.31	0.00	2.03	3.74	1.62	2.45	6.75
8	396306	Transcript	0	0	0	0	0	0	0	0
9	IG7	Intergenic	0	6.31	5.25	5.24	6.34	0.61	6.17	8.24
10	IG7_SR1	SilentIntergenicRegion	0	6.29	5.16	5.60	6.78	0.67	6.77	8.97
11	ER1a	ExonRegion	0	17.61	1.21	7.64	1.65	11.76	0.00	17.84
12	E1a_E2a	KnownJunction	0	48.27	6.09	22.42	4.88	26.81	0.00	46.36
13	ER1b	ExonRegion	0	32.86	5.11	16.98	4.04	29.77	0.34	33.29
14	ER2a	ExonRegion	0	56.35	39.17	40.52	45.83	31.25	30.50	75.43
15	E2a_E3a	KnownJunction	0	4.84	9.22	11.31	12.73	0.92	3.91	2.82
16	E2a_E4a	KnownJunction	0	119.65	36.57	70.17	53.99	33.77	27.01	119.72
17	I2_AR1	ActiveIntronRegion	0	35.64	5.47	15.32	5.87	2.56	4.72	19.57
18	I2_SR3	SilentIntronRegion	0	19.77	5.18	12.04	7.27	3.12	2.68	22.44
19	I2_AR3	ActiveIntronRegion	0	20.00	4.75	14.86	4.71	2.41	2.71	28.06
20	I2_AR4	ActiveIntronRegion	0	21.64	7.69	7.40	8.42	2.06	6.89	19.97
21	ER3a	ExonRegion	0	13.64	8.50	11.52	12.16	2.43	5.82	6.41
22	ER3b	ExonRegion	1	38.99	14.52	22.29	19.07	5.73	8.36	15.88
23	E3_Da	NovelBoundary	0	27.47	4.36	7.57	2.63	4.13	0.00	17.89
24	E3a_E4a	KnownJunction	1	2.84	4.26	5.88	0.00	0.00	12.27	4.20
25	ER3c	ExonRegion	0	16.34	12.55	11.33	7.23	1.08	13.32	10.07
26	I3_AR3	ActiveIntronRegion	0	30.00	14.97	12.20	17.56	2.78	9.93	25.49
27	ER4a	ExonRegion	0	101.27	45.72	65.65	51.27	78.52	39.04	113.78
28	E4a_E5a	KnownJunction	0	109.65	46.08	59.32	41.80	87.72	34.04	115.40
29	E4a_E6a	NovelJunction	0	3.29	3.23	2.37	5.26	1.18	11.58	2.51
30	ER5a	ExonRegion	0	149.94	67.49	76.75	74.98	93.30	60.87	185.00
31	E5a_E6a	KnownJunction	0	202.13	82.39	115.31	106.09	93.96	61.53	230.35
32	ER6a	ExonRegion	0	179.20	76.26	110.18	93.94	77.78	75.23	233.63
33	E6a_E7a	KnownJunction	0	136.71	61.48	89.74	60.93	77.76	71.64	200.24
34	E6a_E8a	KnownJunction	0	16.02	6.94	8.36	6.29	0.95	0.00	13.43
35	ER7a	ExonRegion	0	165.33	50.93	98.59	69.44	117.80	57.03	218.98
36	E7a_E8a	KnownJunction	0	178.23	25.40	95.99	51.07	172.25	46.79	189.13
37	ER8a	ExonRegion	0	204.29	52.97	121.68	68.52	105.02	58.40	243.29
38	E8a_E9a	KnownJunction	0	4.57	2.84	4.11	1.25	0.00	1.02	4.82
39	E8a_E10a	KnownJunction	0	150.81	59.27	97.47	92.19	75.04	68.23	221.72
40	ER9a	ExonRegion	0	5.37	2.63	3.60	4.63	13.33	3.54	4.72
41	E9_Da	NovelBoundary	1	450.33	210.99	300.54	148.49	650.25	112.16	176.85
42	E9a_E10a	KnownJunction	1	22.41	4.33	21.89	2.93	3.48	4.13	3.75
43	ER10a	ExonRegion	0	181.05	69.03	109.32	82.68	72.26	82.49	222.15
44	E10a_E11a	KnownJunction	0	203.70	79.66	128.72	72.22	56.34	77.48	221.89
45	E10a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER11a	ExonRegion	0	195.46	72.73	125.94	95.25	101.21	73.70	249.21
47	E11a_E12a	KnownJunction	0	100.34	38.15	56.68	62.91	48.71	53.47	141.62
48	E11a_E13a	NovelJunction	1	0.82	2.71	6.35	9.10	0.00	14.42	5.56
49	ER12a	ExonRegion	0	67.74	36.93	51.54	50.12	47.22	38.33	127.72
50	E12a_E13a	KnownJunction	0	49.47	45.16	47.58	51.31	62.52	31.54	154.66
51	ER13a	ExonRegion	0	67.72	61.97	51.14	68.83	47.38	57.32	197.80
52	E13a_E14a	KnownJunction	1	39.25	24.17	16.77	6.72	19.20	16.99	104.15
53	E13a_E15a	KnownJunction	0	35.32	32.97	28.01	61.20	8.44	41.33	80.90
54	ER14a	ExonRegion	1	39.02	22.23	16.24	10.66	19.68	20.95	116.14
55	E14a_E15a	KnownJunction	1	32.91	17.86	17.29	15.69	19.92	20.23	108.90
56	ER15a	ExonRegion	0	74.53	46.53	56.35	60.85	47.23	61.61	150.06
57	ER15b	ExonRegion	0	2.31	0.00	2.03	3.74	1.62	2.45	6.75