Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 EIF2B3 Gene 0 71.80 52.43 126.46 63.14 128.18 34.42 102.58 2 360403 Transcript 0 3.84 2.82 8.48 5.36 4.63 5.65 6.41 3 372183 Transcript 0 13.86 11.32 16.01 6.30 24.28 6.86 15.38 4 372182 Transcript 0 0.00 1.34 0.00 0.00 2.16 0.00 0.00 5 396616 Transcript 0 15.50 8.66 26.28 13.93 26.22 5.82 18.30 6 ER1a ExonRegion 0 2.91 0.30 8.92 3.95 3.88 0.20 5.26 7 ER1b ExonRegion 0 16.91 8.50 57.58 17.46 50.21 4.90 38.45 8 ER1c ExonRegion 0 52.25 31.43 128.56 41.27 133.11 16.65 103.93 9 E1a_E2a KnownJunction 0 25.44 19.15 57.58 20.72 22.27 15.28 53.01 10 ER2a ExonRegion 0 58.71 55.00 144.95 61.33 95.37 34.81 104.43 11 E2a_E3a KnownJunction 0 102.53 71.88 216.12 99.02 387.68 54.62 157.62 12 ER3a ExonRegion 0 123.73 89.65 219.34 107.81 266.60 58.79 170.21 13 E3a_E4a KnownJunction 0 133.42 89.40 221.48 101.29 177.71 43.58 163.61 14 ER4a ExonRegion 0 127.57 87.89 215.76 108.49 240.88 47.87 182.76 15 E4a_E5a KnownJunction 0 0.00 1.63 0.00 0.00 0.00 0.00 0.00 16 E4a_E6a KnownJunction 0 128.40 68.20 199.95 91.62 350.43 33.93 151.25 17 ER5a ExonRegion 0 0.00 1.05 0.00 0.00 4.32 0.00 0.00 18 E5_Da NovelBoundary 0 2481.89 1603.69 1888.35 1383.41 995.88 1229.71 1179.93 19 ER6a ExonRegion 0 101.48 77.09 179.63 99.46 239.88 41.71 143.76 20 E6a_E8b KnownJunction 0 113.78 67.78 204.73 106.06 200.03 41.41 133.65 21 E6a_E9a NovelJunction 0 2.65 7.93 3.15 4.09 5.09 0.00 3.45 22 ER7a ExonRegion 0 0.08 0.00 0.07 0.12 0.00 0.00 0.00 23 ER8a ExonRegion 0 30.93 17.31 52.50 27.74 52.44 11.65 36.60 24 ER8b ExonRegion 0 157.02 60.44 229.62 93.72 183.31 47.77 126.88 25 E8a_E9a KnownJunction 0 195.36 53.44 277.20 89.45 253.12 50.57 134.21 26 ER9a ExonRegion 0 190.30 75.47 271.99 97.94 237.91 62.39 148.32 27 E9a_E10a KnownJunction 0 146.15 66.60 215.81 64.56 187.95 53.36 125.99 28 ER10a ExonRegion 0 90.56 69.90 154.45 80.70 137.71 40.75 123.64 29 E10a_E11a KnownJunction 0 73.80 75.64 133.72 75.67 173.01 34.95 132.64 30 ER11a ExonRegion 0 61.43 67.52 130.36 76.61 150.60 43.85 142.00 31 E11_Da NovelBoundary 1 20.73 11.56 0.53 4.06 0.00 6.30 0.00 32 E11a_E12a KnownJunction 1 44.13 76.11 106.97 88.21 130.48 37.52 139.69 33 ER12a ExonRegion 0 55.01 71.99 102.76 76.01 116.95 44.58 130.74 34 E12_Da KnownBoundary 0 16.34 22.02 24.23 6.96 24.87 10.75 18.22 35 E12a_E13a KnownJunction 1 34.06 48.65 80.39 68.89 90.44 29.80 112.89 36 ER12b ExonRegion 0 13.86 11.32 16.01 6.30 24.28 6.86 15.38 37 ER13a ExonRegion 1 29.33 46.15 75.01 60.68 66.77 36.89 96.62 38 E13a_E14a KnownJunction 1 17.76 39.07 40.55 43.13 48.57 26.96 76.47 39 ER14a ExonRegion 0 19.96 27.57 38.75 31.72 41.11 25.61 50.46 40 E14_Da KnownBoundary 0 13.00 9.98 14.21 18.15 6.73 19.72 14.26 41 ER14b ExonRegion 0 4.77 5.34 8.04 6.77 5.37 11.09 7.57 42 IG29 Intergenic 0 13.24 7.63 7.42 5.53 1.35 6.15 3.85 43 IG29_AR4 ActiveIntergenicRegion 0 8.84 9.65 7.21 6.25 2.42 6.92 7.23 44 IG29_SR3 SilentIntergenicRegion 0 12.68 8.33 8.23 6.48 1.55 5.75 4.19 45 IG29_AR3 ActiveIntergenicRegion 0 7.66 7.50 4.29 6.73 1.04 5.30 4.55 46 IG29_SR2 SilentIntergenicRegion 0 16.04 5.47 7.10 3.06 1.10 6.03 3.14 47 IG29_SR1 SilentIntergenicRegion 0 15.11 3.28 9.24 2.21 0.72 5.76 1.46 48 IG29_AR1 ActiveIntergenicRegion 0 15.43 13.70 5.07 9.26 0.53 12.19 1.08